Job Description P31828 Confidence 100.00% Date Thu Jan 5 11:48:53 GMT 2012 Rank 10 Aligned Residues 417 % Identity 20% Template c3amiB_ PDB info PDB header:hydrolase Chain: B: PDB Molecule:zinc peptidase; PDBTitle: the crystal structure of the m16b metallopeptidase subunit from2 sphingomonas sp. a1 Resolution 2.40 Å

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		31	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110
Predicted Secondary structure
Query SS confidence
Query Sequence		Q	D	E	K	L	I	T	G	Q	L	D	N	G	L	R	Y	M	I	Y	P	H	A	H	P	K	D	Q	V	N	L	W	L	Q	I	H	T	G	S	L	Q	E	E	D	N	E	L	G	V	A	H	F	V	E	H	M	M	F	N	G	T	K	T	W	P	G	N	K	V	I	E	T	F	E	S	M	G	L	R	F	G
Query Conservation
Alig confidence																											.																																																		.	.	.	.
Template Conservation																											.																																																		.	.	.	.
Template Sequence		P	A	A	S	T	F	E	T	T	L	P	N	G	L	K	V	V	V	R	E	D	H	R	A	P	.	T	L	V	H	M	V	W	Y	R	V	G	S	M	D	E	T	T	G	T	T	G	V	A	H	A	L	E	H	M	M	F	K	G	T	K	D	V	G	P	G	E	F	S	K	R	V	A	A	M	.	.	.	.	G
Template Known Secondary structure			G	G	G							T	T	S										S	S	S	.									S			G	G	G			T	T		T	T									T	T	S		B	S	S	S		T	T										.	.	.	.	T
Template Predicted Secondary structure																											.																																																		.	.	.	.
Template SS confidence
		29	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.		.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.					.
		111	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.		.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																															.
Query SS confidence																																																															.
Query Sequence		R	D	V	N	A	Y	T	S	Y	D	E	T	V	Y	Q	V	S	L	P	T	T	Q	K	Q	N	L	Q	Q	V	M	A	I	F	S	E	W	S	N	A	A	T	F	E	K	L	E	V	D	A	E	R	G	V	I	T	E	E	W	R	A	H	.	Q	D	A	K	W	R	T	S	Q	A	R	R	P	F	L	L	A	N
Query Conservation																																																															.
Alig confidence																				.	.	.																																									.
Template Conservation																				.	.	.
Template Sequence		G	R	D	N	A	F	T	T	R	D	Y	T	A	Y	Y	Q	Q	V	.	.	.	P	S	S	R	L	S	D	V	M	G	L	E	A	D	R	M	A	N	L	V	V	D	D	E	L	F	K	K	E	I	Q	V	I	A	E	E	R	R	W	R	T	D	D	K	P	R	S	K	A	Y	E	A	L	M	A	A	S	Y	V
Template Known Secondary structure										S	S									.	.	.		G	G	G															B																					T	T	T	T	S															S
Template Predicted Secondary structure																				.	.	.
Template SS confidence
		104	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.				.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180
		190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		T	R	N	L	D	R	E	P	I	G	L	M	D	T	V	A	T	V	T	P	A	Q	L	R	Q	F	Y	Q	R	W	Y	Q	P	N	N	M	T	F	I	V	V	G	D	I	D	S	K	E	A	L	A	L	I	K	D	N	L	S	K	L	P	A	N	K	A	A	E	N	R	V	W	P	T	K	A	E	N	H	L	R
Query Conservation
Alig confidence
Template Conservation
Template Sequence		A	H	P	Y	R	V	P	V	I	G	W	M	N	D	I	Q	N	M	T	A	Q	D	V	R	D	W	Y	K	R	W	Y	G	P	N	N	A	T	V	V	V	V	G	D	V	E	H	E	A	V	F	R	L	A	E	Q	T	Y	G	K	L	A	R	V	E	A	P	A	R	K	Q	Q	G	E	P	Q	Q	A	G	V	R
Template Known Secondary structure		S	S	G	G	G	S		T	T																							S	G	G	G								S												T	T	G	G	G	S																		S
Template Predicted Secondary structure
Template SS confidence
		181	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260
		270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290			.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.
Predicted Secondary structure																							.	.
Query SS confidence																							.	.
Query Sequence		F	N	I	I	N	D	K	E	N	R	V	N	G	I	A	L	Y	Y	R	L	P	.	.	M	V	Q	V	N	D	E	Q	S	F	I	E	Q	A	E	W	S	M	L	V	Q	L	F	N	Q	R	L	Q	E	R	I	Q	S	G	E	L	K	T	I	S	G	G	T	A	R	S	V	K	I	A	P	D	Y	Q	S	L	F
Query Conservation																							.	.
Alig confidence									.														.	.
Template Conservation									.
Template Sequence		R	V	T	V	K	A	P	.	A	E	L	P	Y	L	A	L	A	W	H	V	P	A	I	V	D	L	D	K	S	R	D	A	Y	A	L	E	I	L	A	A	V	L	D	G	Y	D	G	A	R	M	T	R	Q	L	V	R	G	N	K	H	A	V	S	A	G	A	G	Y	D	S	L	S	R	G	Q	Q	G	L	F	I
Template Known Secondary structure									.		S	S													S	S	T	T	S																S	S	T	T	S						T	T	T	T	T															T	T
Template Predicted Secondary structure									.
Template SS confidence
		261	.	.	.	.	.	.		.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.
		348	.		350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.
Predicted Secondary structure				.
Query SS confidence				.
Query Sequence		F	R	.	V	N	A	R	D	D	N	M	Q	D	A	A	N	A	L	M	A	E	L	A	T	I	D	Q	H	G	F	S	A	E	E	L	D	D	V	K	S	T	R	L	T	W	L	K	N	A	V	D	Q	Q	A	E	R	D	L	R	M	L	T	S	R	L	A	S	S	S	L	N	N	T	P	F	L	S	P	E	E
Query Conservation				.
Alig confidence				.																																																		.	.	.	.	.																			.	.	.	.
Template Conservation																																																						.	.	.	.	.																			.	.	.	.
Template Sequence		L	E	G	V	P	S	K	G	V	T	I	A	Q	L	E	T	D	L	R	A	Q	V	R	D	I	A	A	K	G	V	T	E	A	E	L	S	R	V	K	S	Q	M	V	A	G	K	V	Y	E	Q	D	S	.	.	.	.	.	L	M	G	Q	A	T	Q	I	G	G	L	E	V	L	G	L	S	W	.	.	.	.	R
Template Known Secondary structure								T	T																																												S	.	.	.	.	.													T	T	T			T	.	.	.	.	T
Template Predicted Secondary structure																																																						.	.	.	.	.																			.	.	.	.
Template SS confidence
		340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.						.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.					410
		427	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		T	Y	Q	L	S	K	R	L	W	Q	Q	I	T	V	Q	S	L	A	E	K	W	Q	Q	L	R	K	N	Q	D	A	F	W	E	Q	M	V	N	N	E
Query Conservation
Alig confidence
Template Conservation
Template Sequence		D	D	D	R	F	Y	Q	Q	L	R	S	V	T	A	A	E	V	K	A	A	A	A	R	L	L	T	D	D	T	L	T	V	A	N	L	V	P	L	P
Template Known Secondary structure											T	T											G	G	G	S		S	T	T
Template Predicted Secondary structure
Template SS confidence
		411	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.