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Job DescriptionP31828
Confidence100.00%DateThu Jan 5 11:48:53 GMT 2012
Rank1Aligned Residues871
% Identity14%Templatec2jbuB_
PDB info PDB header:hydrolaseChain: B: PDB Molecule:insulin-degrading enzyme; PDBTitle: crystal structure of human insulin degrading enzyme2 complexed with co-purified peptides.
Resolution3.0 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   30... ......40.........50.........60.........70.........80.........90.........100........
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Query Sequence  PQDE. KLITGQLDNGLRYMIYPHAHPKDQVNLWLQIHTGSLQEEDNELGVAHFVEHMMFNGTKTWPGNKVIETFESMGLR
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Template Sequence  PEDKREYRGLELANGIKVLLISDPTTD. KSSAALDVHIGSLSDPPNIAGLSHFCQHMLFLGTKKYPKEN. . . EYSQFLSE
Template Known Secondary structure  TT



TTS

TT
S.S

GGG

TTSTTTT
BSS

STT...TGG
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   58.60.........70.........80.... .....90.........100.........110.........120..... ....130...
 
   109110.........120.........130.........140.........150.........160.........170.........180........
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Query Sequence  FGRDVNAYTSYDETVYQVSLPTTQKQNLQQVMAIFSEWSNAATFEKLEVDAERGVITEEWRAHQDAKWRTSQARRPFLLA
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Template Sequence  HAGSSNAFTSGEHTNYYFDV. . . SHEHLEGALDRFAQFFLCPLFDESCKDREVNAVDSEHEKNVMNDAWRLFQLEKATGN
Template Known Secondary structure  GT

SS
...GGGTTTT
B


T
TS
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   134.....140.........150... ......160.........170.........180.........190.........200.........210
 
   189190.........200...... ...210.........220.........230.........240.........250........ .260
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Query Sequence  NTRNLDREPIGLMDTVAT. . . . . . . VTPAQLRQFYQRWYQPNNMTFIVVGDIDSKEALALIKDNLSKLPANKAAENR. VW
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Template Sequence  PKHPFSKFGTGNKYTLETRPNQEGIDVRQELLKFHSAYYSSNLMAVCVLGRESLDDLTNLVVKLFSEVENKNVPLPEFPE
Template Known Secondary structure  TTSGGG


S

TT



GGGSS
TTS










S
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   211........220.........230.........240.........250.........260.........270.........280.........290
 
   261........270.........280.........290.........300.........310.........320.........330.........340
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Query Sequence  PTKAENHLRFNIINDKENRVNGIALYYRLPMVQVNDEQSFIEQAEWSMLVQLFNQRLQERIQSGELKTISGGTARSVKIA
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Template Sequence  HPFQEEHLKQLYKIVPIKDIRNLYVTFPIPDLQKYYKSNPGHYLGHLIGHEGPGSLLSELKSKGWVNTLVGGQKEGARGF
Template Known Secondary structure 
S

GGGSS
SSS



GGGGGT
T

STT
TT

S
TT
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   291........300.........310.........320.........330.........340.........350.........360.........370
 
   341........350.........360.........370.........380.........390.........400.........410.........420
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Query Sequence  PDYQSLFFRVNARDDNMQDAANALMAELATIDQHGFSAEELDDVKSTRLTWLKNAVDQQAERDLRMLTSRLASSSLNNTP
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Template Sequence  MFFIINVDLTEEGLLHVEDIILHMFQYIQKLRAEGPQEWVFQECKDLNAVAFRFKDKE. . . . RPRGYTSKIAGILHYYPL
Template Known Secondary structure 

TTTT






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TTTS
T
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   371........380.........390.........400.........410.........420........ .430.........440......
 
   421........430.........440.........450.........460...... ...470.........480.......
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Query Sequence  FLSPEETYQLSKRLWQQITVQSLAEKWQQLRKNQDAFWEQMVNNEV. . . . . . . . . . . . . AAKKALSPAAILALEKEYANK
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Template Sequence  . . . . . EEVLTAEYLLEEFRPDLIEMVLD. KLRPENVRVAIVSKSFEGKTDRTEEWYGTQYKQEAIPDEVIKKWQN. . . AD
Template Known Secondary structure  .....TTTT





T.T
SGGG

GGGTT



TTT



T...

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   447..450.........460......... 470.........480.........490.........500.........510..... ..
 
   488.490.........500.........510.........520.........530........ .540.........550.........560......
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Query Sequence  KLAAYVFPGRNLSLTVDADPQAEISSKETLAENLTSLTLSNGARVILAKSA. GEEQKLQIIAVSNKGDLSFPAQQKSLIA
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Template Sequence  LNGKFKLPTKNEFIPTNFEI. . . LPLEKEATPYPALIKDTAMSKLWFKQDDKFFLPKACLNFEFFSPFAYVDPLHCNMAY
Template Known Secondary structure 

TT






TT






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TT

SS

SS

S


S
GGGTSS
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   518.520.........530....... ..540.........550.........560.........570.........580.........590....
 
   567..570.........580.........590.........600.........610.........620.........630.........640......
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Query Sequence  LANKAVSGSGVGELSSSSLKRWSAENSVTMSSKVSGMNTLLSVSARTNNPEPGFQLINQRITHSTINDNIWASLQNAQIQ
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Template Sequence  LYLELLKD. . . . . . SLNEYAYAAELAGLSYDLQNTIYGMYLSVKGYNDKQPILLKKIIEKMATFEIDEKRFEIIKEAYMR
Template Known Secondary structure  ......TT
SSSTTTS



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   595....600.. .......610.........620.........630.........640.........650.........660........
 
   647..650... ......660.........670.........680.........690.........700.........710.........720.....
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Query Sequence  ALKTLDQ. RPAEKFAQQMYETRYADDRTKLLQENQIAQFTAADALAADRQLFSSPADITFVIVGNVAEDKLVALITRYLG
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Template Sequence  SLNNFRAEQPHQHAMYYLRLLMTEVAWTKDELKEALDDVTLPRLKAFIPQLL. SRLHIEALLHGNITKQAALGIMQMVED
Template Known Secondary structure  GGGGS
BSS




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   669670.........680.........690.........700.........710.........720 .........730.........740.......
 
   726. ..730.........740.........750.........760.........770.........780.........790.........800
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Query Sequence  SI. . . . . KHSDSPLAAGKPLTRATDNASVTVKEQNEPVAQVSQWKRYDSRTPVNLPTRMALDAFNVALAKDLRVNIREQA
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Template Sequence  TLIEHAHTKPLLPSQLVRYREVQLPDRGWFVYQQRNEVHNNCGIEIYYQTDMQSTSENMFLELFCQIISEPCFNTLRTKE
Template Known Secondary structure 



TTT




BB


TT
SS
SS

TTTT
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   748.750.........760.........770.........780.........790.........800.........810.........820.......
 
   801........810.........820.........830.........840.........850.........860.........870.........880
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Query Sequence  SGAYSVSSRLSVDPQAKDISHLLAFTCQPERHDELLTLANEVMVKRLAKGISEQELNEYQQNVQRSLDIQQRSVQQLANT
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Template Sequence  QLGYIVFSGPRRANGIQGLRFIIQSEKPPHYLESRVEAFLITMEKSIED. MTEEAFQKHIQALAIRRLDKPKKLSAECAK
Template Known Secondary structure 


S
TTSS
.S



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   828.830.........840.........850.........860.........870...... ...880.........890.........900......
 
   881........ 890.........900.........910....... ..920.........930.
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Query Sequence  IVNSLIQYD. DPAAWTEQEQLLKQMTVENVNTAVKQYL. . . SHPVNTYTGVLLPK
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Template Sequence  YWGEIISQQYNFDRDNTEVAYLKTLTKEDIIKFYKEMLAVDAPRRHKVSVHVLAR
Template Known Secondary structure  TT


TTTT

TSTT
TT

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   907..910.........920.........930.........940.........950.........960.
 
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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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