Job Description P31828 Confidence 100.00% Date Thu Jan 5 11:48:53 GMT 2012 Rank 4 Aligned Residues 870 % Identity 10% Template c2fgeA_ PDB info PDB header:hydrolase, plant protein Chain: A: PDB Molecule:zinc metalloprotease (insulinase family); PDBTitle: crystal structure of presequence protease prep from2 arabidopsis thaliana Resolution 2.10 Å

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		35	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	I	T	G	Q	L	D	N	G	L	R	Y	M	I	Y	P	H	A	H	P	K	D	Q	V	N	L	W	L	Q	I	H	T	G	S	L	Q	E	E	D	N	E	L	G	V	A	H	F	V	E	H	M	M	F	N	G	T	K	T	W	P	G	N	K	V	I	E	T	F	E	S	M	G	L	R	F	G	R	D	V	N
Query Conservation
Alig confidence																												.	.	.	.	.	.																																	.	.
Template Conservation																												.	.	.	.	.	.																																	.	.
Template Sequence		I	L	F	K	H	K	K	T	G	C	E	V	X	S	V	S	N	E	D	E	N	K	V	F	G	V	.	.	.	.	.	.	V	F	R	T	P	P	K	D	S	T	G	I	P	H	I	L	Q	H	S	V	L	C	G	S	R	K	Y	P	V	K	E	P	.	.	F	V	E	L	L	K	G	S	L	H	T	F	L	N
Template Known Secondary structure							T	T	T										S		S	S						.	.	.	.	.	.							S	S	S	S										T	T	S		B	T	T	B		S	S			.	.
Template Predicted Secondary structure																												.	.	.	.	.	.																																	.	.
Template SS confidence
		38	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.							.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.			.	.	.	.	100	.	.	.	.	.	.	.	.	.
		115	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.																		.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.
Predicted Secondary structure																																														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		A	Y	T	S	Y	D	E	T	V	Y	Q	V	S	L	P	T	T	Q	K	Q	N	L	Q	Q	V	M	A	I	F	S	E	W	S	N	A	A	T	F	E	K	L	E	V	D	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	A	E	R	G	V	I	T	E	E	W	R	A	H	Q	D	A	K	W	R
Query Conservation																																														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																	.	.																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																	.	.
Template Sequence		A	F	T	Y	P	D	R	T	C	Y	P	V	A	S	T	.	.	N	T	K	D	F	Y	N	L	V	D	V	Y	L	D	A	V	F	F	P	K	C	V	D	D	A	H	T	F	Q	Q	E	G	W	H	Y	E	L	N	D	P	S	E	D	I	S	Y	K	G	V	V	F	N	E	X	K	G	V	Y	S	Q	P	D	N
Template Known Secondary structure						S	S									S	.	.	S																	S	B	G	G	G	T	S	S							T						S		T	T	S																T	T	S
Template Predicted Secondary structure																	.	.
Template SS confidence
		110	.	.	.	.	.	.	.	.	.	120	.	.	.	.			.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.
		178	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		T	S	Q	A	R	R	P	F	L	L	A	N	T	R	N	L	D	R	E	P	I	G	L	M	D	T	V	A	T	V	T	P	A	Q	L	R	Q	F	Y	Q	R	W	Y	Q	P	N	N	M	T	F	I	V	V	G	D	I	D	S	K	E	A	L	A	L	I	K	D	N	L	S	K	L	P	A	N	K	A	A	E	N
Query Conservation
Alig confidence
Template Conservation
Template Sequence		I	L	G	R	I	A	Q	Q	A	L	S	P	E	N	T	Y	G	V	D	S	G	G	D	P	K	D	I	P	N	L	T	F	E	E	F	K	E	F	H	R	Q	Y	Y	H	P	S	N	A	R	I	W	F	Y	G	D	D	D	P	V	H	R	L	R	V	L	S	E	Y	L	D	X	F	E	A	S	P	S	P	N	S
Template Known Secondary structure													T	T	S	G	G	G	S		T	T			T	T	T	G	G	G														S	S	G	G	G								S	S														T	T					S
Template Predicted Secondary structure
Template SS confidence
		188	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.
		258	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.								.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330
Predicted Secondary structure																				.	.	.	.	.	.	.
Query SS confidence																				.	.	.	.	.	.	.
Query Sequence		R	V	W	P	T	K	A	E	N	H	L	R	F	N	I	I	N	D	.	.	.	.	.	.	.	K	E	N	R	V	N	G	I	A	L	Y	Y	R	L	P	M	V	Q	V	N	D	E	Q	S	F	I	E	Q	A	E	W	S	M	L	V	Q	L	F	N	Q	R	L	Q	E	R	I	Q	S	G	E	L	K	T	I	S
Query Conservation																				.	.	.	.	.	.	.
Alig confidence																				.	.	.	.	.	.	.
Template Conservation
Template Sequence		S	K	I	K	F	Q	K	L	F	S	E	P	V	R	L	V	E	K	Y	P	A	G	R	D	G	D	L	K	K	K	H	X	L	C	V	N	W	L	L	S	E	K	P	L	D	L	Q	T	Q	L	A	L	G	F	L	D	H	L	X	L	G	T	P	A	S	P	L	R	K	I	L	L	E	S	G	L	G	E	A	L
Template Known Secondary structure		S									S	S												S	S	S		G	G	G												S	S																			S	S	T	T	S									T	T	S		S
Template Predicted Secondary structure
Template SS confidence
		268	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.
		331	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410
Predicted Secondary structure
Query SS confidence
Query Sequence		G	G	T	A	R	S	V	K	I	A	P	D	Y	Q	S	L	F	F	R	V	N	A	R	D	D	N	M	Q	D	A	A	N	A	L	M	A	E	L	A	T	I	D	Q	H	G	F	S	A	E	E	L	D	D	V	K	S	T	R	L	T	W	L	K	N	A	V	D	Q	Q	A	E	R	D	L	R	M	L	T	S	R
Query Conservation
Alig confidence			.
Template Conservation			.
Template Sequence		V	.	S	S	G	L	S	D	E	L	L	Q	P	Q	F	G	I	G	L	K	G	V	S	E	E	N	V	Q	K	V	E	E	L	I	X	D	T	L	K	K	L	A	E	E	G	F	D	N	D	A	V	E	A	S	X	N	T	I	E	F	S	L	R	E	N	N	T	G	S	F	P	R	G	L	S	L	X	L	Q	S
Template Known Secondary structure			.	S						S	S	S	S												G	G	G																																										T	T	S
Template Predicted Secondary structure			.
Template SS confidence
		348		.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.
		411	.	.	.	.	.	.	.	.	420	.	.	.				.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.
Predicted Secondary structure															.	.	.																																																																.
Query SS confidence															.	.	.																																																																.
Query Sequence		L	A	S	S	S	L	N	N	T	P	F	L	S	.	.	.	P	E	E	T	Y	Q	L	S	K	R	L	W	Q	Q	I	T	V	Q	S	L	A	E	K	W	Q	Q	L	R	K	N	Q	D	A	F	W	E	Q	M	V	N	N	E	V	A	A	K	K	A	L	S	P	A	A	I	L	A	L	E	K	E	Y	A	N	.
Query Conservation															.	.	.																																																																.
Alig confidence															.	.	.																																																																.
Template Conservation
Template Sequence		I	S	K	W	I	Y	D	X	D	P	F	E	P	L	K	Y	T	E	P	L	K	A	L	K	T	R	I	A	E	E	G	S	K	A	V	F	S	P	L	I	E	K	L	I	L	N	N	S	H	R	V	T	I	E	X	Q	P	D	P	E	K	A	T	Q	E	E	V	E	E	K	N	I	L	E	K	V	K	A	A	X
Template Known Secondary structure						T	T	T	S		S	S	G	G	G																														T	T	T													T	T																			T	S
Template Predicted Secondary structure
Template SS confidence
		427	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.
														487	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence		.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		.	.	.	.	.	.	.	.	.	.	.	.	K	K	L	A	A	Y	V	F	P	G	R	N	L	S	L	T	V	D	A	D	P	Q	A	E	I	S	S	K	E	T	L	A	E	N	L	T	S	L	T	L	S	N	G	A	R	V	I	L	A	K	S	A	G	E	E	Q	K	L	Q	I	I	A	V	S	N	K	G	D
Query Conservation		.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.																																																						.
Template Conservation																																																																			.
Template Sequence		T	E	E	D	L	A	E	L	A	R	A	T	E	E	L	K	L	K	Q	E	T	P	D	P	P	E	A	L	R	C	V	P	S	L	N	L	G	D	I	P	K	E	P	T	Y	V	P	T	E	V	G	D	I	N	G	V	K	V	L	R	H	D	L	F	T	.	N	D	I	I	Y	T	E	V	V	F	D	I	G	S
Template Known Secondary structure																					T	S								T	T	S					G	G	G	S		S	S											S	S	S	S										.	S	S											T	T
Template Predicted Secondary structure																																																																			.
Template SS confidence
		507	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.	.	.	.	.	570	.		.	.	.	.	.	.	.	.	580	.	.	.	.	.
		555	.	.	.	.	560	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.											.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.
Predicted Secondary structure																																																				.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																				.	.	.	.	.	.	.	.	.	.
Query Sequence		L	S	F	P	A	Q	Q	K	S	L	I	A	L	A	N	K	A	V	S	G	S	G	V	G	E	L	S	S	S	S	L	K	R	W	S	A	E	N	S	V	T	M	S	S	K	V	S	G	M	N	.	.	.	.	.	.	.	.	.	.	T	L	L	S	V	S	A	R	T	N	N	P	E	P	G	F	Q	L	I	N
Query Conservation																																																				.	.	.	.	.	.	.	.	.	.
Alig confidence			.	.																																																.	.	.	.	.	.	.	.	.	.
Template Conservation			.	.
Template Sequence		L	.	.	K	H	E	L	L	P	L	V	P	L	F	C	Q	S	L	L	E	X	G	T	K	D	L	T	F	V	Q	L	N	Q	L	I	G	R	K	T	G	G	I	S	V	Y	P	L	T	S	S	V	R	G	K	D	E	P	C	S	K	I	I	V	R	G	K	S	X	A	G	R	A	D	D	L	F	N	L	X	N
Template Known Secondary structure		S	.	.		T	T	T	G	G	G											S			S	S	S													S	S												T	T																G	G	G
Template Predicted Secondary structure			.	.
Template SS confidence
		586			.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630	.	.	.	.	.	.	.	.	.	640	.	.	.	.	.	.	.	.	.	650	.	.	.	.	.	.	.	.	.	660	.	.	.
		625	.	.	.	.	630	.	.		.	.	.	.	.	.	.	640	.	.	.	.	.	.	.	.	.	650	.	.	.	.	.	.	.	.	.	660	.	.	.	.	.	.	.	.	.	670	.	.	.																	.	.	.	.	.	.	680	.	.	.	.	.	.	.
Predicted Secondary structure										.																																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence										.																																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		Q	R	I	T	H	S	T	I	.	N	D	N	I	W	A	S	L	Q	N	A	Q	I	Q	A	L	K	T	L	D	Q	R	P	A	E	K	F	A	Q	Q	M	Y	E	T	R	Y	A	D	D	R	T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	K	L	L	Q	E	N	Q	I	A	Q	F	T	A	A
Query Conservation										.																																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence										.																																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		C	L	L	Q	E	V	Q	F	T	D	Q	Q	R	F	K	Q	F	V	S	Q	S	R	A	R	X	E	N	R	L	R	G	S	G	H	G	I	A	A	A	R	X	D	A	X	L	N	I	A	G	W	X	S	E	Q	X	G	G	L	S	Y	L	E	F	L	H	T	L	E	K	K	V	D	E	D	W	E	G	I	S	S
Template Known Secondary structure									S																																				T	T												S
Template Predicted Secondary structure
Template SS confidence
		664	.	.	.	.	.	670	.	.	.	.	.	.	.	.	.	680	.	.	.	.	.	.	.	.	.	690	.	.	.	.	.	.	.	.	.	700	.	.	.	.	.	.	.	.	.	710	.	.	.	.	.	.	.	.	.	720	.	.	.	.	.	.	.	.	.	730	.	.	.	.	.	.	.	.	.	740	.	.	.
		688	.	690	.	.	.	.	.	.	.	.	.	700	.	.	.	.	.	.	.	.	.	710	.	.	.		.	.	.	.	.	.	720	.	.	.	.	.	.	.	.	.	730	.	.	.	.	.	.	.	.	.	740	.	.	.	.	.	.	.	.	.	750	.	.	.	.	.	.	.	.	.	760	.	.	.	.	.	.
Predicted Secondary structure																												.
Query SS confidence																												.
Query Sequence		D	A	L	A	A	D	R	Q	L	F	S	S	P	A	D	I	T	F	V	I	V	G	N	V	A	E	.	D	K	L	V	A	L	I	T	R	Y	L	G	S	I	K	H	S	D	S	P	L	A	A	G	K	P	L	T	R	A	T	D	N	A	S	V	T	V	K	E	Q	N	E	P	V	A	Q	V	S	Q	W	K	R
Query Conservation																												.
Alig confidence												.																.																		.	.
Template Conservation												.																																		.	.
Template Sequence		S	L	E	E	I	R	R	S	L	L	.	A	R	N	G	C	I	V	N	X	T	A	D	G	K	S	L	T	N	V	E	K	S	V	A	K	F	L	D	L	L	P	E	N	.	.	P	S	G	G	L	V	T	W	D	G	R	L	P	L	R	N	E	A	I	V	I	P	T	Q	V	N	Y	V	G	K	A	G	N	I
Template Known Secondary structure												.		S	T	T																									T	S		S	S	.	.		S	S		S																	S		S	S	B								G
Template Predicted Secondary structure												.																																		.	.
Template SS confidence
		744	.	.	.	.	.	750	.	.	.		.	.	.	.	.	.	760	.	.	.	.	.	.	.	.	.	770	.	.	.	.	.	.	.	.	.	780	.	.	.	.	.	.			.	.	.	790	.	.	.	.	.	.	.	.	.	800	.	.	.	.	.	.	.	.	.	810	.	.	.	.	.	.	.	.	.	820
		767	.	.	770	.	.	.	.	.	.	.	.	.	780	.	.	.	.	.	.	.	.	.	790	.	.	.	.	.	.	.	.	.	800	.	.	.	.	.	.	.	.	.	810	.	.	.	.	.	.	.	.	.	820	.	.	.	.	.	.	.	.	.	830	.	.	.	.	.	.	.	.	.	840	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Y	D	S	R	T	P	V	N	L	P	T	R	M	A	L	D	A	F	N	V	A	L	A	K	D	L	R	V	N	I	R	E	Q	A	S	G	A	Y	S	V	S	S	R	L	S	V	D	P	Q	A	K	D	I	S	H	L	L	A	F	T	C	Q	P	E	R	H	D	E	L	L	T	L	A	N	E	V	M	V	K	R
Query Conservation
Alig confidence																					.	.	.												.											.	.	.	.																.
Template Conservation																					.	.	.												.											.	.	.	.																.
Template Sequence		Y	S	T	G	Y	E	L	D	G	S	A	Y	V	I	S	K	H	I	S	.	.	.	N	T	W	L	W	D	R	V	R	V	S	.	G	G	A	Y	G	G	F	C	D	F	.	.	.	.	D	S	H	S	G	V	F	S	Y	L	S	Y	R	D	P	.	N	L	L	K	T	L	D	I	Y	D	G	T	G	D	F	L
Template Known Secondary structure		G	G	G	T					T											.	.	.		T						T	T	T	T	.	T			S							.	.	.	.		T	T	T	T								S	B	S	.		S									T
Template Predicted Secondary structure																					.	.	.												.											.	.	.	.																.
Template SS confidence
		821	.	.	.	.	.	.	.	.	830	.	.	.	.	.	.	.	.	.				840	.	.	.	.	.	.	.	.	.	850		.	.	.	.	.	.	.	.	.	860					.	.	.	.	.	.	.	.	.	870	.	.	.	.	.		.	.	.	.	880	.	.	.	.	.	.	.	.	.	890	.
		847	.	.	850	.	.	.	.	.	.	.	.	.	860	.	.	.	.	.	.	.	.	.	870	.	.	.	.	.	.	.	.	.	880	.	.	.	.	.	.	.	.	.	890	.	.	.	.	.	.	.	.	.	900	.	.	.	.	.	.	.	.	.	910	.	.	.	.	.	.	.	.	.	920	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	A	K	G	I	S	E	Q	E	L	N	E	Y	Q	Q	N	V	Q	R	S	L	D	I	Q	Q	R	S	V	Q	Q	L	A	N	T	I	V	N	S	L	I	Q	Y	D	D	P	A	A	W	T	E	Q	E	Q	L	L	K	Q	M	T	V	E	N	V	N	T	A	V	K	Q	Y	L	S	H	P	V	N	T	Y	T	G
Query Conservation
Alig confidence																							.
Template Conservation																							.
Template Sequence		R	G	L	D	V	D	Q	E	T	L	T	K	A	I	I	G	T	I	G	D	V	.	D	S	Y	Q	L	P	D	A	K	G	Y	S	S	L	L	R	H	L	L	G	V	T	D	E	E	R	Q	R	K	R	E	E	I	L	T	T	S	L	K	D	F	K	D	F	A	Q	A	I	D	V	V	R	D	K	G	V	A	V
Template Known Secondary structure			T																				.	T																		T	T															T
Template Predicted Secondary structure																							.
Template SS confidence
		892	.	.	.	.	.	.	.	900	.	.	.	.	.	.	.	.	.	910	.	.		.	.	.	.	.	.	.	920	.	.	.	.	.	.	.	.	.	930	.	.	.	.	.	.	.	.	.	940	.	.	.	.	.	.	.	.	.	950	.	.	.	.	.	.	.	.	.	960	.	.	.	.	.	.	.	.	.	970
		927	.	.	930	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	L	L	P	K
Query Conservation
Alig confidence
Template Conservation
Template Sequence		A	V	A	S	A
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		971	.	.	.	.