Job Description P39336 Confidence 7.76% Date Thu Jan 5 11:59:27 GMT 2012 Rank 31 Aligned Residues 67 % Identity 12% Template d1y14a_ SCOP info SAM domain-like HRDC-like RNA polymerase II subunit RBP4 (RpoF) Resolution 2.30

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		442	.	.	.	.	.	.	.	450	.	.	.	.		.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.
Predicted Secondary structure															.
Query SS confidence															.
Query Sequence		I	W	N	K	L	V	V	Y	V	N	E	F	N	.	L	S	N	R	E	K	T	N	L	I	Q	R	L	F	D	N	V	E	S	I	F	N	E	V	P	V	S	I	L	V	N	D	I	F	M	N	D	F	F	M	K	N	P	E	M	I	N	W	Y	F	P	Q	L	L	K	S	Y	E	G	E	K	I
Query Conservation															.
Alig confidence															.																			.	.												.	.	.	.	.	.
Template Conservation																																		.	.												.	.	.	.	.	.
Template Sequence		D	L	K	N	T	M	Q	Y	L	T	N	F	S	R	F	R	D	Q	E	T	V	G	A	V	I	Q	L	L	K	S	T	G	.	.	L	H	P	F	E	V	A	Q	L	G	S	.	.	.	.	.	.	L	A	C	D	T	A	D	E	A	K	T	L	I	P	S	L	N	N	K	I	S	D	D	E	L
Template Known Secondary structure															S			S													T	T	T	.	.												.	.	.	.	.	.	S			S	S								S	G	G	G	T	T	T	S
Template Predicted Secondary structure																																		.	.												.	.	.	.	.	.
Template SS confidence
		140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.			.	.	.	.	.	.	.	.	180	.	.							.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions