Job Description P39336 Confidence 4.89% Date Thu Jan 5 11:59:27 GMT 2012 Rank 58 Aligned Residues 55 % Identity 18% Template c3kuzA_ PDB info PDB header:signaling protein Chain: A: PDB Molecule:plexin-c1; PDBTitle: crystal structure of the ubiquitin like domain of plxnc1 Resolution 2.30 Å

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		102	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.									.	.	.	.	.	.	.	160	.	.	.	.	.	.
Predicted Secondary structure																																																					.	.	.	.	.	.	.	.
Query SS confidence																																																					.	.	.	.	.	.	.	.
Query Sequence		F	Y	M	N	N	P	V	G	E	R	A	D	S	P	K	V	I	I	E	I	S	L	S	T	I	T	T	M	G	T	R	Q	G	H	T	A	I	I	F	P	Q	P	D	G	S	T	N	R	Y	E	G	.	.	.	.	.	.	.	.	K	S	F	E	R	K	D	E	S	S	L	H	L	I
Query Conservation																																																					.	.	.	.	.	.	.	.
Alig confidence																					.	.	.	.	.	.	.	.	.	.																							.	.	.	.	.	.	.	.
Template Conservation																					.	.	.	.	.	.	.	.	.	.
Template Sequence		F	L	S	K	N	G	S	P	Y	G	L	Q	L	N	E	I	G	L	E	.	.	.	.	.	.	.	.	.	.	L	Q	M	G	T	R	Q	K	E	L	L	D	I	D	S	S	S	V	I	L	E	D	G	I	T	K	L	N	T	I	G	H	Y	E	I	S	N	G	S	T	I	K	V	F
Template Known Secondary structure							S	S			S	S		G	G	G					.	.	.	.	.	.	.	.	.	.				T	T							S	S		T	T			B		T	T	S		B				B	T	G	G	G	T			T	T
Template Predicted Secondary structure																					.	.	.	.	.	.	.	.	.	.
Template SS confidence
		1241	.	.	.	.	.	.	.	.	1250	.	.	.	.	.	.	.	.	.											1260	.	.	.	.	.	.	.	.	.	1270	.	.	.	.	.	.	.	.	.	1280	.	.	.	.	.	.	.	.	.	1290	.	.	.	.	.	.	.	.	.	1300	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions