Job Description P39336 Confidence 4.33% Date Thu Jan 5 11:59:27 GMT 2012 Rank 73 Aligned Residues 69 % Identity 14% Template c3bmbB_ PDB info PDB header:rna binding protein Chain: B: PDB Molecule:regulator of nucleoside diphosphate kinase; PDBTitle: crystal structure of a new rna polymerase interacting2 protein Resolution 1.91 Å

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		92	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		K	D	T	N	G	N	E	K	M	K	F	Y	M	N	N	P	V	G	E	R	A	D	S	P	K	V	I	I	E	I	S	L	S	T	I	T	T	M	G	T	R	Q	G	H	T	A	I	I	F	P	Q	P	D	G	S	T	N	R	Y	E	G	K	S	F	E	R	K	D	E	S	S
Query Conservation
Alig confidence																															.																			.
Template Conservation																															.																			.
Template Sequence		R	N	L	S	D	G	E	V	R	V	R	T	L	V	Y	P	A	K	M	T	D	S	N	T	Q	L	S	V	M	.	A	P	V	G	A	A	L	L	G	L	R	V	G	D	S	I	H	W	.	E	L	P	G	G	V	A	T	H	L	E	V	L	E	L	E	Y	Q	P	E	A	A
Template Known Secondary structure				T	T	T											G	G	G				T	T	T				T	T	.	S							T	T		B	T	T						.			T	T	T														T	T	T	T
Template Predicted Secondary structure																															.																			.
Template SS confidence
		63	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.		.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.		110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions