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Job DescriptionP80668
Confidence100.00%DateThu Jan 5 12:33:16 GMT 2012
Rank11Aligned Residues475
% Identity40%Templated1ag8a_
SCOP infoALDH-like ALDH-like ALDH-like
Resolution2.65

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   1920.........30.........40.........50.........60.........70.. .......80.........90.......
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Query Sequence  QHGLYIDGRPGPAQSEKRLAIFDPATGQEIASTADANEADVDNAVMSAWRAFVS. RRWAGRLPAERERILLRFADLVEQH
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Template Sequence  YNQIFINNEWHDAVSKKTFPTVNPSTGDVICHVAEGDKADVDRAVKAARAAFQLGSPWRRMDASERGRLLNRLADLIERD
Template Known Secondary structure 

SSSS


TT


TTT


B
TSTT
S
T
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   1920.........30.........40.........50.........60.........70.........80.........90........
 
   98.100.........110.........120.........130.........140.........150.........160.........170.......
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Query Sequence  SEELAQLETLEQGKSIAISRAFEVGCTLNWMRYTAGLTTKIAGKTLDLSIPLPQGARYQAWTRKEPVGVVAGIVPWNFPL
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Template Sequence  RTYLAALETLDNGKPYIISYLVDLDMVLKCLRYYAGWADKYHGKTIPIDG. . . . . . DYFSYTRHEPVGVCGQIIPWNFPL
Template Known Secondary structure 
S
TTTTTT





SS......S



SSS
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   99100.........110.........120.........130.........140........ .150.........160.........170..
 
   178.180.........190.........200.........210.........220.........230.........240.........250.......
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Query Sequence  MIGMWKVMPALAAGCSIVIKPSETTPLTMLRVAELASEAGIPDGVFNVVTGSGAVCGAALTSHPHVAKISFTGSTATGKG
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Template Sequence  LMQAWKLGPALATGNVVVMKVAEQTPLTALYVANLIKEAGFPPGVVNVIPGFGPTAGAAIASHEDVDKVAFTGSTEVGHL
Template Known Secondary structure  T

TTS
T

TTSB
T
TT

S
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   173......180.........190.........200.........210.........220.........230.........240.........250..
 
   258.260.... .....270.........280.........290.........300.........310.........320.........330......
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Query Sequence  IARTAAD. HLTRVTLELGGKNPAIVLKDADPQWVIEGLMTGSFLNQGQVCAASSRIYIEAPLFDTLVSGFEQAVKSLQVG
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Template Sequence  IQVAAGKSNLKRVTLEIGGKSPNIIMSDADMDWAVEQAHFALFFNQGQCCCAGSRTFVQEDIYAEFVERSVARAKSRVVG
Template Known Secondary structure  TT







TTS
GGGG

TT




B
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   253......260.........270.........280.........290.........300.........310.........320.........330..
 
   337..340.........350.........360.........370.........380.........390.........400.........410......
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Query Sequence  PGMSPVAQINPLVSRAHCDKVCSFLDDAQAQQAELIRGSNGPAGEGYYVAPTLVVNPDAKLRLTREEVFGPVVNLVRVAD
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Template Sequence  NPFDSRTEQGPQVDETQFKKVLGYIKSGKEEGLKLLCGGGAAADRGYFIQPTVFGDLQDGMTIAKEEIFGPVMQILKFKS
Template Known Secondary structure 
TTSTT
SB


SST


SBS
SSS

B

S

TTSS


SS

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   333......340.........350.........360.........370.........380.........390.........400.........410..
 
   417..420.........430.........440.........450.........460.........470.........480.........490......
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Query Sequence  GEEALQLANDTEYGLTASVWTQNLSQALEYSDRLQAGTVWVNSHTLIDANLPFGGMKQSGTGRDFGPDWLDGWCETKSVC
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Template Sequence  MEEVVGRANNSKYGLAAAVFTKDLDKANYLSQALQAGTVWVNCYDVFGAQSPFGGYKLSGSGRELGEYGLQAYTEVKTVT
Template Known Secondary structure 
SS

S
S
S

SS
SS


TTS



SSTTS

STTTT
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   413......420.........430.........440.........450.........460.........470.........480.........490..
 
   497..
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Query Sequence  VRY
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Template Conservation     
Template Sequence  VRV
Template Known Secondary structure 
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   493..
 
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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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