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Job DescriptionP80668
Confidence100.00%DateThu Jan 5 12:33:16 GMT 2012
Rank14Aligned Residues471
% Identity32%Templatec3rh9A_
PDB info PDB header:oxidoreductaseChain: A: PDB Molecule:succinate-semialdehyde dehydrogenase (nad(p)(+)); PDBTitle: the crystal structure of oxidoreductase from marinobacter aquaeolei
Resolution2.63 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   18.20.........30.........40.........50.........60.........70.........80.........90.......
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Query Sequence  RQHGLYIDGRPGPAQSEKRLAIFDPATGQEIASTADANEADVDNAVMSAWRAFVSRRWAGRLPAERERILLRFADLVEQH
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Template Sequence  ENLTGYIGGRWKDSAGGATFDVYNPATGSVIAKVPSXPEEDVVAAVEAGQSAL. . RLTNPWPIETRRKWLEDIRDGLKEN
Template Known Secondary structure  S

STT


TT

TTT





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SSS


T
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   8.10.........20.........30.........40.........50.........60 .........70.........80.....
 
   98.100.........110.........120.........130.........140.........150.........160.........170.......
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Query Sequence  SEELAQLETLEQGKSIAISRAFEVGCTLNWMRYTAGLTTKIAGKTLDLSIPLPQGARYQAWTRKEPVGVVAGIVPWNFPL
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Template Sequence  REEIGRILCXEHGKPWKEAQG. EVDYAAGFFDYCAKHISALDSHTIPEKPK. . . . . DCTWTVHYRPVGVTGLIVPWNFPI
Template Known Secondary structure 


.GGGG


S

GG.....G


S

SSSTT
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   86...90.........100...... ...110.........120.........130..... ....140.........150.........
 
   178.180.........190.........200.........210.........220.........230.........240.........250.......
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Query Sequence  MIGMWKVMPALAAGCSIVIKPSETTPLTMLRVAELASEAGIPDGVFNVVTGSGAVCGAALTSHPHVAKISFTGSTATGKG
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Template Sequence  GXIAKKLSAALAAGCPSVIKPASETPLTXIAFFSVXDKLDLPDGXVNLVXGKASVIGKVLCEHKDVPXLSFTGSTEVGRK
Template Known Secondary structure  T



TTS
TTTT

TTS

S

TT

S
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   160.........170.........180.........190.........200.........210.........220.........230.........
 
   258.260.........270.........280.........290.........300.........310.........320.........330.......
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Query Sequence  IARTAADHLTRVTLELGGKNPAIVLKDADPQWVIEGLMTGSFLNQGQVCAASSRIYIEAPLFDTLVSGFEQAVKSLQVGP
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Template Sequence  LIVDTAEQVKKLALELGGNAPFIVFDDADLEAAADNLIANKFRGGGQTCVCANRIFVHEKVADAFGQKLAERVNKXTVGD
Template Known Secondary structure  TTTTT






TTS
GGGG
SSSS

TTT

BS
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   240.........250.........260.........270.........280.........290.........300.........310.........
 
   338.340.........350.........360.........370.........380 .........390.........400.........410......
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Query Sequence  GMSPVAQINPLVSRAHCDKVCSFLDDAQAQQAELIRGSNGPAG. EGYYVAPTLVVNPDAKLRLTREEVFGPVVNLVRVAD
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Template Sequence  GXNDGIDIGPLINKQGFDKVKRHLQDALDKGASLVAGKQPAELGDGLFFPPTVVQGVDREXCCYQEETFGPLVPXALFRT
Template Known Secondary structure  TTSTT
SB


S
TT
S

GGG

SSS






TTSS


SS

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   320.........330.........340.........350.........360.........370.........380.........390.........
 
   417..420.........430.........440.........450.........460.........470.........480.........490......
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Query Sequence  GEEALQLANDTEYGLTASVWTQNLSQALEYSDRLQAGTVWVNSHTLIDANLPFGGMKQSGTGRDFGPDWLDGWCETKSVC
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Template Sequence  EEEVIDAGNDTEFGLASYVFTADAERAQRVAAGLRFGHVGWNTGTGPTPEAPFGGXKASGIGREGGLEGLFEFVEAQTVP
Template Known Secondary structure  T
SS

S
S



SS





TTS
B

SGGGS
BSTTT
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   400.........410.........420.........430.........440.........450.........460.........470.........
 
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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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