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Job DescriptionP80668
Confidence100.00%DateThu Jan 5 12:33:16 GMT 2012
Rank20Aligned Residues472
% Identity38%Templatec3r31A_
PDB info PDB header:oxidoreductaseChain: A: PDB Molecule:betaine aldehyde dehydrogenase; PDBTitle: crystal structure of betaine aldehyde dehydrogenase from agrobacterium2 tumefaciens
Resolution2.15 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   1920.........30.........40.........50.........60.........70.........80.........90........
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Query Sequence  QHGLYIDGRPGPAQSEKRLAIFDPATGQEIASTADANEADVDNAVMSAWRAFVSRRWAGRLPAERERILLRFADLVEQHS
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Template Sequence  KASHFIDGDYVEDNTGTPFESIFPATGEMIAKLHAATPAIVERAIASAKRAQ. . KEWAAMSPMARGRILKRAADIMRERN
Template Known Secondary structure  SSSTT

TTS

TTT




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   14.....20.........30.........40.........50.........60..... ....70.........80.........90.
 
   99100.........110.........120.........130.........140.........150.........160.........170........
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Query Sequence  EELAQLETLEQGKSIAISRAFEVGCTLNWMRYTAGLTTKIAGKTLDLSIPLPQGARYQAWTRKEPVGVVAGIVPWNFPLM
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Template Sequence  DALSTLETLDTGKPIQETIVADPTSGADAFEFFGGIAPSALNGDYIPLG. . . . . . GDFAYTKRVPLGVCVGIGAWNYPQQ
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ST



S......SS
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   92.......100.........110.........120.........130.........140 .........150.........160.....
 
   179180.........190.........200.........210.........220.........230.........240.........250........
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Query Sequence  IGMWKVMPALAAGCSIVIKPSETTPLTMLRVAELASEAGIPDGVFNVVTGSGAVCGAALTSHPHVAKISFTGSTATGKGI
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Template Sequence  IACWKAAPALVAGNAMVFKPSENTPLGALKIAEILIEAGLPKGLFNVIQGDR. DTGPLLVNHPDVAKVSLTGSVPTGRKV
Template Known Secondary structure  TT


TTS
STT

TTS



T.TT
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   166...170.........180.........190.........200.........210....... ..220.........230.........240....
 
   259260.........270.........280.........290.........300.........310.........320.........330........
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Query Sequence  ARTAADHLTRVTLELGGKNPAIVLKDADPQWVIEGLMTGSFLNQGQVCAASSRIYIEAPLFDTLVSGFEQAVKSLQVGPG
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Template Sequence  AAAAAGHLKHVTMELGGKSPMIVFDDADIESAVGGAMLGNFYSSGQVCSNGTRVFVQKKAKARFLENLKRRTEAMILGDP
Template Known Secondary structure  TT





TTS
TS

TT
GGG

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   245....250.........260.........270.........280.........290.........300.........310.........320....
 
   339340.........350.........360.........370.........380. ........390.........400.........410.....
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Query Sequence  MSPVAQINPLVSRAHCDKVCSFLDDAQAQQAELIRGSNGPAGE. . . GYYVAPTLVVNPDAKLRLTREEVFGPVVNLVRVA
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Template Sequence  LDYATHLGPLVSKAQQEKVLSYIEKGKAEGATLITGGGIPNNVAGEGAYVQPTVFADVTDDMTIAREEIFGPVMCVLDFD
Template Known Secondary structure  TSTT
SB

BS
T


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   325....330.........340.........350.........360.........370.........380.........390.........400....
 
   416...420.........430.........440.........450.........460.........470.........480.........490.....
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Query Sequence  DGEEALQLANDTEYGLTASVWTQNLSQALEYSDRLQAGTVWVNSHTLIDANLPFGGMKQSGTGRDFGPDWLDGWCETKSV
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Template Sequence  DEDEVLARANATEFGLAGGVFTADLARAHRVVDGLEAGTLWINTYNLCPVEIPFGGSKQSGFGRENSAAALEHYSELKTV
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SSS
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S

SSS




TTS
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TT

BSTGGGGGGS
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   405....410.........420.........430.........440.........450.........460.........470.........480....
 
   496...
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Query Sequence  CVRY
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Template Sequence  YVST
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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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