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Job DescriptionP80668
Confidence100.00%DateThu Jan 5 12:33:16 GMT 2012
Rank7Aligned Residues486
% Identity31%Templatec3qanB_
PDB info PDB header:oxidoreductaseChain: B: PDB Molecule:1-pyrroline-5-carboxylate dehydrogenase 1; PDBTitle: crystal structure of 1-pyrroline-5-carboxylate dehydrogenase from2 bacillus halodurans
Resolution1.95 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   3......10.........20.........30.........40... ......50.........60.........70.........80.
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Query Sequence  EPHVAVLSQVQQFLDRQHGLYIDGRPGPAQSEKRLAIFDPA. TGQEIASTADANEADVDNAVMSAWRAFVSRRWAGRLPA
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Template Sequence  KAFEEALGLVEKELGKEYPLIINGERV. . TTEDKIQSWNPARKDQLVGSVSKANQDLAEKAIQSADEAF. . QTWRNVNPE
Template Known Secondary structure  TTT
TT..

SS
SSSTT



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   20.........30.........40...... ...50.........60.........70.........80...... ...90.....
 
   82.......90.........100.........110.........120.........130.........140.........150.........160.
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Query Sequence  ERERILLRFADLVEQHSEELAQLETLEQGKSIAISRAFEVGCTLNWMRYTAGLTTKIAGKTLDLSIPLPQGARYQAWTRK
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Template Sequence  ERANILVKAAAIIRRRKHEFSAWLVHEAGKPWKEADA. DTAEAIDFLEYYARQMIELNRGKEILSRP. . . . . GEQNRYFY
Template Known Secondary structure  T


.TT
B




T.....T
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   96...100.........110.........120.........130.. .......140.........150.........160. ........
 
   162.......170.........180.........190.........200.........210.........220.........230.........240.
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Query Sequence  EPVGVVAGIVPWNFPLMIGMWKVMPALAAGCSIVIKPSETTPLTMLRVAELASEAGIPDGVFNVVTGSGAVCGAALTSHP
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Template Sequence  TPMGVTVTISPWNFALAIMVGTAVAPIVTGNTVVLKPASTTPVVAAKFVEVLEDAGLPKGVINYVPGSGAEVGDYLVDHP
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STTTTTT


TTST

TTS



TTTT
T
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   170.........180.........190.........200.........210.........220.........230.........240.........
 
   242.......250.........260... ......270.........280.........290.........300.........310.....
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Query Sequence  HVAKISFTGSTATGKGIARTAA. . . . . . DHLTRVTLELGGKNPAIVLKDADPQWVIEGLMTGSFLNQGQVCAASSRIYIE
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Template Sequence  KTSLITFTGSKDVGVRLYERAAVVRPGQNHLKRVIVEMGGKDTVVVDRDADLDLAAESILVSAFGFSGQKCSAGSRAVIH
Template Known Secondary structure  TS
S

TT

S







TTS
GGGG
STT


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   250.........260.........270.........280.........290.........300.........310.........320.........
 
   316...320.........330.........340.........350.........360.........370.........380.........390.....
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Query Sequence  APLFDTLVSGFEQAVKSLQVGPGMSPVAQINPLVSRAHCDKVCSFLDDAQAQQAELIRGSNGPAGEGYYVAPTLVVNPDA
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Template Sequence  KDVYDEVLEKTVALAKNLTVGDPTNRDNYMGPVIDEKAFEKIMSYIEIGKKEGRLMTG. GEGDSSTGFFIQPTIIADLDP
Template Known Secondary structure  TTTTT

BS
TTSTT
SB


SSTTS
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SSS


S

T
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   330.........340.........350.........360.........370.........380....... ..390.........400........
 
   396...400.........410.........420.........430.........440.........450.........460.... .....470...
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Query Sequence  KLRLTREEVFGPVVNLVRVADGEEALQLANDTEYGLTASVWTQNLSQALEYSDRLQAGTVWVNSHTLID. . ANLPFGGMK
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Template Sequence  EAVIMQEEIFGPVVAFSKANDFDHALEIANNTEYGLTGAVITRNRAHIEQAKREFHVGNLYFNRNCTGAIVGYHPFGGFK
Template Known Secondary structure  TSGGGTS


SSSST
SSS
S
S

SSS
S



TTTS
B

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   409410.........420.........430.........440.........450.........460.........470.........480........
 
   474.....480 .........490.........
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Query Sequence  QSGTGRD. FGPDWLDGWCETKSVCVRY
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Template Sequence  MSGTDSKAGGPDYLALHMQAKTVSEMY
Template Known Secondary structure  TTBS


BTSTTTGGGG
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   489490.........500.........510.....
 
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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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