Return to main results Retrieve Phyre Job Id

Job DescriptionP80668
Confidence11.71%DateThu Jan 5 12:33:16 GMT 2012
Rank67Aligned Residues62
% Identity11%Templatec3lo3E_
PDB info PDB header:structure genomics, unknown functionChain: E: PDB Molecule:uncharacterized conserved protein; PDBTitle: the crystal structure of a conserved functionally unknown2 protein from colwellia psychrerythraea 34h.
Resolution2.38 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   348.350.........360....... ..370.........380.........390.........400.........410.........420......
Predicted Secondary structure 



.

























Query SS confidence 



















.


























































Query Sequence  LVSRAHCDKVCSFLDDAQAQ. QAELIRGSNGPAGEGYYVAPTLVVNPDAKLRLTREEVFGPVVNLVRVADGEEALQLAND
Query Conservation   
           
  
   .

     
           



            
 




 
    
  


   
 
Alig confidence 



















.


















....................



















Template Conservation 
 
      
           

  
  
           ....................   






  

     
Template Sequence  PKDAEKLQQYGARVASTLAKYSGEVLVKGSVEQLHGKFEH. . . . . . . . . . . . . . . . . . . . KAQVILEFPSREDAYNWYHS
Template Known Secondary structure 

T




SS



....................SSSTS
Template Predicted Secondary structure 












....................





Template SS confidence 















































































   11........20.........30.........40.........50 .........60.........70
 
   427..
Predicted Secondary structure 


Query SS confidence 


Query Sequence  TEY
Query Conservation     
Alig confidence 


Template Conservation 


Template Sequence  EEY
Template Known Secondary structure 
Template Predicted Secondary structure 
Template SS confidence 


   71..
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions