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Job DescriptionP80668
Confidence100.00%DateThu Jan 5 12:33:16 GMT 2012
Rank18Aligned Residues471
% Identity34%Templatec3ek1C_
PDB info PDB header:oxidoreductaseChain: C: PDB Molecule:aldehyde dehydrogenase; PDBTitle: crystal structure of aldehyde dehydrogenase from brucella2 melitensis biovar abortus 2308
Resolution2.10 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   1920.........30.........40.........50.........60.........70.........80.........90........
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Query Sequence  QHGLYIDGRPGPAQSEKRLAIFDPATGQEIASTADANEADVDNAVMSAWRAFVSRRWAGRLPAERERILLRFADLVEQHS
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Template Sequence  KSQCLVNGRWIDAADGTTIKVTNPADGSVIGTVPSLSVATIKEAIDASAKAL. . SGWAAKTAKERAGILRKWFDLIIANA
Template Known Secondary structure 
SSTT

TT


TTT




..S
T
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   11........20.........30.........40.........50.........60.. .......70.........80........
 
   99100.........110.........120.........130.........140.........150.........160.........170........
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Query Sequence  EELAQLETLEQGKSIAISRAFEVGCTLNWMRYTAGLTTKIAGKTLDLSIPLPQGARYQAWTRKEPVGVVAGIVPWNFPLM
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Template Sequence  DDIALIMTSEQGKPLAEARG. EVLYAASFIEWFAEEAKRVYGDTIPAPQN. . . . . GQRLTVIRQPVGVTAAITPWNFPAA
Template Known Secondary structure 


.TT




SST.....T



SSSTT
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   8990.........100........ .110.........120.........130....... ..140.........150.........160..
 
   179180.........190.........200.........210.........220.........230.........240.........250........
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Query Sequence  IGMWKVMPALAAGCSIVIKPSETTPLTMLRVAELASEAGIPDGVFNVVTGSGAVCGAALTSHPHVAKISFTGSTATGKGI
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Template Sequence  MITRKAAPALAAGCTMIVRPADLTPLTALALGVLAEKAGIPAGVLQIVTGKAREIGAELTSNDTVRKLSFTGSTEVGRLL
Template Known Secondary structure  T


TTST

TTT

S

TTS
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   163......170.........180.........190.........200.........210.........220.........230.........240..
 
   259260.........270.........280.........290.........300.........310.........320.........330........
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Query Sequence  ARTAADHLTRVTLELGGKNPAIVLKDADPQWVIEGLMTGSFLNQGQVCAASSRIYIEAPLFDTLVSGFEQAVKSLQVGPG
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Template Sequence  MAQCAPTIKRISLELGGNAPFIVFDDADLDAAVDGAMVSKYRNAGQTCVCANRIYVQRGVYDKFAEKLAAKVKELKVGNG
Template Known Secondary structure  GGGT





TTS
GGGG
STTST

BS
T
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   243......250.........260.........270.........280.........290.........300.........310.........320..
 
   339340.........350.........360.........370.........380.........390.........400.........410........
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Query Sequence  MSPVAQINPLVSRAHCDKVCSFLDDAQAQQAELIRGSNGPAGEGYYVAPTLVVNPDAKLRLTREEVFGPVVNLVRVADGE
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Template Sequence  TEPGVVIGPMIEEKAITKVKAHIEDAVSKGAKLITGGKEL. . GGLFFEPGILTGVTSDMLVAKEETFGPLAPLFAFDTEE
Template Known Secondary structure  TSTT

B


S
TT


SB
..STT
B


TTSS


SS

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   323......330.........340.........350.........360.. .......370.........380.........390.........400
 
   419420.........430.........440.........450.........460.........470.........480.........490........
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Query Sequence  EALQLANDTEYGLTASVWTQNLSQALEYSDRLQAGTVWVNSHTLIDANLPFGGMKQSGTGRDFGPDWLDGWCETKSVCVR
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Template Sequence  EVIAQANDTIFGLAAYFYTENFSRAIRVSEALEYGMVGHNTGLISNEVAPFGGVKQSGLGREGSKYGIEEYLETKYICSA
Template Known Secondary structure  T
SS

S
S
S

SS
S



SSS
B

SGGGS
BSTTTSGGGG
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   401........410.........420.........430.........440.........450.........460.........470.........480
 
   499
Predicted Secondary structure 
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Query Sequence  Y
Query Conservation   
Alig confidence 
Template Conservation   
Template Sequence  Y
Template Known Secondary structure 
Template Predicted Secondary structure 
Template SS confidence 
   481
 
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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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