Job Description P80668 Confidence 24.64% Date Thu Jan 5 12:33:16 GMT 2012 Rank 54 Aligned Residues 237 % Identity 14% Template c3e5bB_ PDB info PDB header:lyase Chain: B: PDB Molecule:isocitrate lyase; PDBTitle: 2.4 a crystal structure of isocitrate lyase from brucella2 melitensis Resolution 2.37 Å

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		172	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240					.	.	.	.	.	.	.
Predicted Secondary structure																																																																							.	.	.	.
Query SS confidence																																																																							.	.	.	.
Query Sequence		P	W	N	F	P	L	M	I	G	M	W	K	V	M	P	A	L	A	A	G	C	S	I	V	I	K	P	S	E	T	T	P	L	T	M	L	R	V	A	E	L	A	S	E	A	G	I	P	D	G	V	F	N	V	V	T	G	S	G	A	V	C	G	A	A	L	T	S	H	.	.	.	.	P	H	V	A	K	I	S
Query Conservation																																																																							.	.	.	.
Alig confidence																																					.	.	.	.											.	.	.	.	.																.	.	.	.
Template Conservation																																					.	.	.	.											.	.	.	.	.
Template Sequence		E	I	K	Y	S	L	A	E	M	G	A	N	R	L	W	K	L	I	H	E	E	D	F	V	N	A	L	G	A	L	S	G	N	Q	A	.	.	.	.	M	Q	M	V	R	A	G	L	K	A	.	.	.	.	.	I	Y	L	S	G	W	Q	V	A	A	D	A	N	T	A	S	A	M	Y	P	D	Q	S	L	Y	P
Template Known Secondary structure																						S	S						B		S	S					.	.	.	.						T	T		S		.	.	.	.	.														T	T		S				S	S	S		S
Template Predicted Secondary structure																																					.	.	.	.											.	.	.	.	.
Template SS confidence
		36	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70					.	.	.	.	.	.	.	.	.	80						.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.
		248	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.							.	.	280	.	.	.	.	.	.	.			.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																.	.	.	.	.	.											.	.
Query SS confidence																																.	.	.	.	.	.											.	.
Query Sequence		F	T	G	S	T	A	T	G	K	G	I	A	R	T	A	A	D	H	L	T	R	V	T	L	E	L	G	G	K	N	.	.	.	.	.	.	P	A	I	V	L	K	D	A	D	P	.	.	Q	W	V	I	E	G	L	M	T	G	S	F	L	N	Q	G	Q	V	C	A	A	S	S	R	I	Y	I	E	A	P	L	F
Query Conservation																																.	.	.	.	.	.											.	.
Alig confidence																																.	.	.	.	.	.											.	.
Template Conservation
Template Sequence		A	N	A	G	P	E	L	A	K	R	I	N	R	T	L	Q	R	A	D	Q	I	E	T	A	E	G	K	G	L	S	V	D	T	W	F	A	P	I	V	A	D	A	E	A	G	F	G	G	P	L	D	A	F	E	I	M	K	A	Y	I	E	A	G	A	A	G	V	H	F	E	D	Q	L	A	S	G	K	V	L	I
Template Known Secondary structure		T	T																								T	S			S	S	S		S									T	T	T	T	S	S															T		S						S	B
Template Predicted Secondary structure
Template SS confidence
		107	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.
		320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	T	L	V	S	G	F	E	Q	A	V	K	S	L	Q	V	G	P	G	M	S	P	V	A	Q	I	N	P	L	V	S	R	A	H	C	D	K	V	C	S	F	L	D	D	A	Q	A	Q	Q	A	E	L	I	R	G	S	N	G	P	A	G	E	G	Y	Y	V	A	P	T	L	V	V	N	P	D	A	K	L	R	L
Query Conservation
Alig confidence				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																											.	.	.
Template Conservation				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																											.	.	.
Template Sequence		P	T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	A	A	H	I	R	N	L	N	A	A	R	L	A	A	D	V	M	G	T	P	T	L	I	V	A	R	T	D	A	E	A	A	K	L	L	T	S	D	I	D	E	R	.	.	.	D	Q	P	F
Template Known Secondary structure				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																		T											T	T	T					S				S	T	T	.	.	.	T	G	G	G
Template Predicted Secondary structure				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																											.	.	.
Template SS confidence
		195	.																														.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.				.	240	.	.
		400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.		.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.					.	440	.	.	.	.	.	.	.	.	.	450
Predicted Secondary structure																		.																								.	.	.	.
Query SS confidence																		.																								.	.	.	.
Query Sequence		T	R	E	E	V	F	G	P	V	V	N	L	V	R	V	A	.	D	G	E	E	A	L	Q	L	A	N	D	T	E	Y	G	L	T	A	S	V	W	T	Q	.	.	.	.	N	L	S	Q	A	L	E	Y	S	D	R	L
Query Conservation																		.																								.	.	.	.
Alig confidence																		.																.								.	.	.	.
Template Conservation																																		.
Template Sequence		V	D	Y	E	A	G	R	T	A	E	G	F	Y	Q	V	K	N	G	I	E	P	C	I	A	R	A	I	A	Y	A	P	Y	.	C	D	L	I	W	M	E	T	S	K	P	D	L	A	Q	A	R	R	F	A	E	A	V
Template Known Secondary structure		B		T	T	S		B		T	T	S				B			S												G	G	G	.		S							S	S
Template Predicted Secondary structure																																		.
Template SS confidence
		243	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.		.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions