Job Description P80668 Confidence 100.00% Date Thu Jan 5 12:33:16 GMT 2012 Rank 24 Aligned Residues 470 % Identity 34% Template c2w8qA_ PDB info PDB header:oxidoreductase Chain: A: PDB Molecule:succinate-semialdehyde dehydrogenase, PDBTitle: the crystal structure of human ssadh in complex with ssa. Resolution 2.40 Å

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		19	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Q	H	G	L	Y	I	D	G	R	P	G	P	A	Q	S	E	K	R	L	A	I	F	D	P	A	T	G	Q	E	I	A	S	T	A	D	A	N	E	A	D	V	D	N	A	V	M	S	A	W	R	A	F	V	S	R	R	W	A	G	R	L	P	A	E	R	E	R	I	L	L	R	F	A	D	L	V	E	Q	H	S
Query Conservation
Alig confidence													.	.																																								.	.
Template Conservation													.	.																																								.	.
Template Sequence		R	T	D	S	F	V	G	G	R	W	L	.	.	P	A	A	A	T	F	P	V	Q	D	P	A	S	G	A	A	L	G	M	V	A	D	C	G	V	R	E	A	R	A	A	V	R	A	A	Y	E	A	F	.	.	C	R	W	R	E	V	S	A	K	E	R	S	S	L	L	R	K	W	Y	N	L	M	I	Q	N	K
Template Known Secondary structure				S				T	T				.	.			S								T	T	T																											.	.				T	T	S																			T
Template Predicted Secondary structure													.	.																																								.	.
Template SS confidence
		60	.	.	.	.	.	.	.	.	.	70			.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.			110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.
		99	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	E	L	A	Q	L	E	T	L	E	Q	G	K	S	I	A	I	S	R	A	F	E	V	G	C	T	L	N	W	M	R	Y	T	A	G	L	T	T	K	I	A	G	K	T	L	D	L	S	I	P	L	P	Q	G	A	R	Y	Q	A	W	T	R	K	E	P	V	G	V	V	A	G	I	V	P	W	N	F	P	L	M
Query Conservation
Alig confidence																						.																														.	.	.	.	.
Template Conservation																						.																														.	.	.	.	.
Template Sequence		D	D	L	A	R	I	I	T	A	E	S	G	K	P	L	K	E	A	H	G	.	E	I	L	Y	S	A	F	F	L	E	W	F	S	E	E	A	R	R	V	Y	G	D	I	I	H	T	P	A	K	.	.	.	.	.	D	R	R	A	L	V	L	K	Q	P	I	G	V	A	A	V	I	T	P	W	N	F	P	S	A
Template Known Secondary structure																						.																G	G	G									S		T	.	.	.	.	.	T																			S	S	S	T	T
Template Predicted Secondary structure																						.																														.	.	.	.	.
Template SS confidence
		136	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.		.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.						.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.
		179	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230				.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.
Predicted Secondary structure																																																						.	.	.
Query SS confidence																																																						.	.	.
Query Sequence		I	G	M	W	K	V	M	P	A	L	A	A	G	C	S	I	V	I	K	P	S	E	T	T	P	L	T	M	L	R	V	A	E	L	A	S	E	A	G	I	P	D	G	V	F	N	V	V	T	G	S	G	.	.	.	A	V	C	G	A	A	L	T	S	H	P	H	V	A	K	I	S	F	T	G	S	T	A	T	G
Query Conservation																																																						.	.	.
Alig confidence																																																						.	.	.
Template Conservation
Template Sequence		M	I	T	R	K	V	G	A	A	L	A	A	G	C	T	V	V	V	K	P	A	E	D	T	P	F	S	A	L	A	L	A	E	L	A	S	Q	A	G	I	P	S	G	V	Y	N	V	I	P	C	S	R	K	N	A	K	E	V	G	E	A	I	C	T	D	P	L	V	S	K	I	S	F	T	G	S	T	T	T	G
Template Known Secondary structure														T									T	T	S															T			T	T	S																			T	T		T	T
Template Predicted Secondary structure
Template SS confidence
		210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.
		256	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.		.	.
Predicted Secondary structure																																																																															.
Query SS confidence																																																																															.
Query Sequence		K	G	I	A	R	T	A	A	D	H	L	T	R	V	T	L	E	L	G	G	K	N	P	A	I	V	L	K	D	A	D	P	Q	W	V	I	E	G	L	M	T	G	S	F	L	N	Q	G	Q	V	C	A	A	S	S	R	I	Y	I	E	A	P	L	F	D	T	L	V	S	G	F	E	Q	A	V	K	S	.	L	Q
Query Conservation																																																																															.
Alig confidence																																																																															.
Template Conservation
Template Sequence		K	I	L	L	H	H	A	A	N	S	V	K	R	V	S	M	E	L	G	G	L	A	P	F	I	V	F	D	S	A	N	V	D	Q	A	V	A	G	A	M	A	S	K	F	R	N	T	G	Q	T	A	V	C	S	N	Q	F	L	V	Q	R	G	I	H	D	A	F	V	K	A	F	A	E	A	M	K	K	N	L	R
Template Known Secondary structure										T	T	T																	T	T	S															T	T	T	T		S	T	T	S
Template Predicted Secondary structure
Template SS confidence
		290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.
		335	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	G	P	G	M	S	P	V	A	Q	I	N	P	L	V	S	R	A	H	C	D	K	V	C	S	F	L	D	D	A	Q	A	Q	Q	A	E	L	I	R	G	S	N	G	P	A	G	E	G	Y	Y	V	A	P	T	L	V	V	N	P	D	A	K	L	R	L	T	R	E	E	V	F	G	P	V	V	N	L	V	R	V
Query Conservation
Alig confidence
Template Conservation
Template Sequence		V	G	N	G	F	E	E	G	T	T	Q	G	P	L	I	N	E	K	A	V	E	K	V	E	K	Q	V	N	D	A	V	S	K	G	A	T	V	V	T	G	G	K	R	H	Q	L	G	K	N	F	F	E	P	T	L	L	C	N	V	T	Q	D	M	L	C	T	H	E	E	T	F	G	P	L	A	P	V	I	K	F
Template Known Secondary structure		B	S		T	T	S	T	T			B				S	S																T	T	T								S	B		T	T		T	T		B							S			G	G	G	G	T	T		T	T			S	S
Template Predicted Secondary structure
Template SS confidence
		370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.
		415	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	D	G	E	E	A	L	Q	L	A	N	D	T	E	Y	G	L	T	A	S	V	W	T	Q	N	L	S	Q	A	L	E	Y	S	D	R	L	Q	A	G	T	V	W	V	N	S	H	T	L	I	D	A	N	L	P	F	G	G	M	K	Q	S	G	T	G	R	D	F	G	P	D	W	L	D	G	W	C	E	T	K	S
Query Conservation
Alig confidence
Template Conservation
Template Sequence		D	T	E	E	E	A	I	A	I	A	N	A	A	D	V	G	L	A	G	Y	F	Y	S	Q	D	P	A	Q	I	W	R	V	A	E	Q	L	E	V	G	M	V	G	V	N	E	G	L	I	S	S	V	E	C	P	F	G	G	V	K	Q	S	G	L	G	R	E	G	S	K	Y	G	I	D	E	Y	L	E	L	K	Y
Template Known Secondary structure		S										T		S	S			S																			S		S	S					S		S					T	T	S		B			S	G	G	G			S		B	S	T	T	T	G	G	G	G	G
Template Predicted Secondary structure
Template SS confidence
		450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.
		495	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	C	V	R
Query Conservation
Alig confidence
Template Conservation
Template Sequence		V	C	Y	G
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		530	.	.	.