Job Description P80668 Confidence 100.00% Date Thu Jan 5 12:33:16 GMT 2012 Rank 44 Aligned Residues 369 % Identity 20% Template c2h5gA_ PDB info PDB header:oxidoreductase Chain: A: PDB Molecule:delta 1-pyrroline-5-carboxylate synthetase; PDBTitle: crystal structure of human pyrroline-5-carboxylate synthetase Resolution 2.25 Å

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		59	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.												.	.	.	.	.	.	.	120	.	.	.	.	.	.	.
Predicted Secondary structure																																																								.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																								.	.	.	.	.	.	.	.	.	.	.
Query Sequence		V	D	N	A	V	M	S	A	W	R	A	F	V	S	R	R	W	A	G	R	L	P	A	E	R	E	R	I	L	L	R	F	A	D	L	V	E	Q	H	S	E	E	L	A	Q	L	E	T	L	E	Q	G	K	S	.	.	.	.	.	.	.	.	.	.	.	I	A	I	S	R	A	F	E	V	G	C	T	L	N	W
Query Conservation																																																								.	.	.	.	.	.	.	.	.	.	.
Alig confidence														.	.																																									.	.	.	.	.	.	.	.	.	.	.							.
Template Conservation														.	.																																																										.
Template Sequence		V	E	Q	Q	G	E	X	A	R	S	G	G	.	.	R	X	L	A	T	L	E	P	E	Q	R	A	E	I	I	H	H	L	A	D	L	L	T	D	Q	R	D	E	I	L	L	A	N	K	K	D	L	E	E	A	E	G	R	L	A	A	P	L	L	K	R	L	S	L	S	T	S	.	K	L	N	S	L	A	I	G
Template Known Secondary structure														.	.						S																			T																T	T	T	S							T	T						.
Template Predicted Secondary structure														.	.																																																										.
Template SS confidence
		363	.	.	.	.	.	.	370	.	.	.	.			.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.		.	.	.	.	.	.	.	.
		128	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		M	R	Y	T	A	G	L	T	T	K	I	A	G	K	T	L	D	L	S	I	P	L	P	Q	G	A	R	Y	Q	A	W	T	R	K	E	P	V	G	V	V	A	G	I	V	P	W	N	F	P	L	M	I	G	M	W	K	V	M	P	A	L	A	A	G	C	S	I	V	I	K	P	S	E	T	T	P	L	T	M	L
Query Conservation
Alig confidence																							.	.	.																				.						.
Template Conservation																							.	.	.																				.						.
Template Sequence		L	R	Q	I	A	A	S	S	Q	D	S	V	G	R	V	L	R	R	T	R	I	.	.	.	A	K	N	L	E	L	E	Q	V	T	V	P	I	G	V	L	L	V	I	.	F	E	S	R	P	.	D	C	L	P	Q	V	A	A	L	A	I	A	S	G	N	G	L	L	L	K	G	G	K	E	A	A	H	S	N	R
Template Known Secondary structure										T	T	S	T	T									.	.	.		T	T																	.		S	S		T	.	T													T									G	G	G
Template Predicted Secondary structure																							.	.	.																				.						.
Template SS confidence
		440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460				.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.		480	.	.	.	.		.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.
		208	.	210	.	.	.	.	.	.	.	.	.	220	.	.				.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.
Predicted Secondary structure																	.	.	.
Query SS confidence																	.	.	.
Query Sequence		R	V	A	E	L	A	S	E	A	G	I	P	D	G	V	.	.	.	F	N	V	V	T	G	S	G	A	V	C	G	A	A	L	T	S	H	P	H	V	A	K	I	S	F	T	G	S	T	A	T	G	K	G	I	A	R	T	A	A	D	H	L	T	R	V	T	L	E	L	G	G	K	N	P	A	I	V	L	K	D
Query Conservation																	.	.	.
Alig confidence																	.	.	.									.	.	.	.	.	.	.	.																									.	.
Template Conservation																												.	.	.	.	.	.	.	.																									.	.
Template Sequence		I	L	H	L	L	T	Q	E	A	L	S	I	H	G	V	K	E	A	V	Q	L	V	N	T	R	E	.	.	.	.	.	.	.	.	E	V	K	X	I	D	L	I	I	P	R	G	S	S	Q	L	V	R	D	I	Q	K	A	A	.	.	K	G	I	P	V	X	G	H	S	E	G	I	C	H	X	Y	V	D	S	E
Template Known Secondary structure													T	T	T		G	G	G						T	T		.	.	.	.	.	.	.	.						S						S													.	.	S	S	S		B		S		S										T	T
Template Predicted Secondary structure																												.	.	.	.	.	.	.	.																									.	.
Template SS confidence
		515	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540									.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.			.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.
		285	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	D	P	Q	W	V	I	E	G	L	M	T	G	S	F	L	N	Q	G	Q	V	C	A	A	S	S	R	I	Y	I	E	A	P	L	F	D	T	L	V	S	G	F	E	Q	A	V	K	S	L	Q	V	G	P	G	M	S	P	V	A	Q	I	N	P	L	V	S	R	A	H	C	D	K	V	C	S	F	L	D	D	A
Query Conservation
Alig confidence																	.																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																	.																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		A	S	V	D	K	V	T	R	L	V	R	D	S	K	C	.	E	Y	P	A	A	C	N	A	L	E	T	L	L	I	H	R	D	L	L	R	T	P	L	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	F	D	Q	I	I	D	X	L
Template Known Secondary structure				T	T	T											.	S		T	T	S	T	T	S								G	G	G	T	T	S			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																	.																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		592	.	.	.	.	.	.	.	600	.	.	.	.	.	.		.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.																																		630	.	.	.	.	.	.	.
		365	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Q	A	Q	Q	A	E	L	I	R	G	S	N	G	P	A	G	E	G	Y	Y	V	A	P	T	L	V	V	N	P	D	A	K	L	R	L	T	R	E	E	V	F	G	P	V	V	N	L	V	R	V	A	D	G	E	E	A	L	Q	L	A	N	D	T	E	Y	G	L	T	A	S	V	W	T	Q	N	L	S	Q	A	L
Query Conservation
Alig confidence							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		R	V	E	Q	V	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	K	I	H	A	G	P	K	F	A	S	K	S	L	R	T	E	Y	G	D	L	E	L	C	I	E	V	V	D	N	V	Q	D	A	I	D	H	I	H	K	Y	G	S	S	H	T	D	V	I	V	T	E	D	E	N	T	A	E
Template Known Secondary structure				T	T		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.													S	S					S	S								S	S														S	S							S
Template Predicted Secondary structure							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		638	.	640	.	.																			.	.	.	.	.	.	.	650	.	.	.	.	.	.	.	.	.	660	.	.	.	.	.	.	.	.	.	670	.	.	.	.	.	.	.	.	.	680	.	.	.	.	.	.	.	.	.	690	.	.	.	.	.	.	.	.	.
		445	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.					.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.
Predicted Secondary structure																																			.	.	.	.
Query SS confidence																																			.	.	.	.
Query Sequence		E	Y	S	D	R	L	Q	A	G	T	V	W	V	N	S	H	T	L	I	D	A	N	L	P	F	G	G	M	K	Q	S	G	T	.	.	.	.	G	R	D	F	G	P	D	W	L	D	G	W	C	E	T	K	S	V	C	V
Query Conservation																																			.	.	.	.
Alig confidence																																			.	.	.	.
Template Conservation
Template Sequence		F	F	L	Q	H	V	D	S	A	C	V	F	W	N	A	S	T	R	F	S	D	G	Y	R	F	G	L	G	A	E	V	G	I	S	T	S	R	I	H	A	R	G	P	V	G	L	E	G	L	L	T	T	K	W	L	L	R
Template Known Secondary structure									S	S					S	S		G	G	G		S	T	T	T	T	T	S	S			S						S	S	S							G	G	G	G
Template Predicted Secondary structure
Template SS confidence
		709	710	.	.	.	.	.	.	.	.	.	720	.	.	.	.	.	.	.	.	.	730	.	.	.	.	.	.	.	.	.	740	.	.	.	.	.	.	.	.	.	750	.	.	.	.	.	.	.	.	.	760	.	.	.	.	.