Job Description P80668 Confidence 9.76% Date Thu Jan 5 12:33:16 GMT 2012 Rank 77 Aligned Residues 142 % Identity 17% Template c2fugA_ PDB info PDB header:oxidoreductase Chain: A: PDB Molecule:nadh-quinone oxidoreductase chain 1; PDBTitle: crystal structure of the hydrophilic domain of respiratory complex i2 from thermus thermophilus Resolution 3.30 Å

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		251	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.			.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.
Predicted Secondary structure																				.	.
Query SS confidence																				.	.
Query Sequence		S	T	A	T	G	K	G	I	A	R	T	A	A	D	H	L	T	R	.	.	V	T	L	E	L	G	G	K	N	P	A	I	V	L	K	D	A	D	P	Q	W	V	I	E	G	L	M	T	G	S	F	L	N	Q	G	Q	V	C	A	A	S	S	R	I	Y	I	E	A	P	L	F	D	T	L	V	S	G	F	E	Q
Query Conservation																				.	.
Alig confidence																				.	.																																		.
Template Conservation																																																							.
Template Sequence		G	F	P	T	G	L	K	W	S	F	M	P	K	D	D	G	K	Q	H	Y	L	I	C	N	A	D	E	S	E	P	G	S	F	K	D	R	Y	I	L	E	D	V	P	H	L	L	I	E	G	M	I	L	A	.	G	Y	A	I	R	A	T	V	G	Y	I	Y	V	R	G	E	Y	R	R	A	A	D	R	L	E	Q
Template Known Secondary structure				B							T	S		S	S	S														S	T	T			S																				.					T										T	T
Template Predicted Secondary structure																																																							.
Template SS confidence
		69	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.		.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.
		329	330	.	.	.	.										.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.
Predicted Secondary structure								.	.	.	.	.	.	.	.	.
Query SS confidence								.	.	.	.	.	.	.	.	.
Query Sequence		A	V	K	S	L	Q	.	.	.	.	.	.	.	.	.	V	G	P	G	M	S	P	V	A	Q	I	N	P	L	V	S	R	A	H	C	D	K	V	C	S	F	L	D	D	A	Q	A	Q	Q	A	E	L	I	R	G	S	N	G	P	A	G	E	G	Y	Y	V	A	P	T	L	V	V	N	P
Query Conservation								.	.	.	.	.	.	.	.	.
Alig confidence								.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		A	I	K	E	A	R	A	R	G	Y	L	G	K	N	L	F	G	T	D	F	S	F	D	L	H	V	H	R	G	A	G	A	Y	I	C	G	E	E	T	A	L	M	N	S	L	E	G	L	R	A	N	P	R	L	K	P	P	F	P	A	Q	S	G	L	W	G	K	P	T	T	I	N	N	V
Template Known Secondary structure									T	T	S	S	B	S	S	T	T	S	T	T			B									S		G	G	G	G	S									T	T	S							S	S	S		T	T	T	S	B	G	G	G	B
Template Predicted Secondary structure
Template SS confidence
		148	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions