Job Description P80668 Confidence 100.00% Date Thu Jan 5 12:33:16 GMT 2012 Rank 8 Aligned Residues 488 % Identity 36% Template c2d4eB_ PDB info PDB header:oxidoreductase Chain: B: PDB Molecule:5-carboxymethyl-2-hydroxymuconate semialdehyde PDBTitle: crystal structure of the hpcc from thermus thermophilus hb8 Resolution 2.10 Å

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		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80
Predicted Secondary structure
Query SS confidence
Query Sequence		M	T	E	P	H	V	A	V	L	S	Q	V	Q	Q	F	L	D	R	Q	H	G	L	Y	I	D	G	R	P	G	P	A	Q	S	E	K	R	L	A	I	F	D	P	A	T	G	Q	E	I	A	S	T	A	D	A	N	E	A	D	V	D	N	A	V	M	S	A	W	R	A	F	V	S	R	R	W	A	G	R	L	P
Query Conservation
Alig confidence							.	.																																																																.	.
Template Conservation							.	.																																																																.	.
Template Sequence		I	S	W	E	T	.	.	I	E	E	V	R	R	R	L	K	E	R	P	A	L	H	F	I	A	G	E	F	V	P	S	E	S	G	E	T	F	P	S	L	D	P	A	T	N	E	V	L	G	V	A	A	R	G	G	E	R	E	V	D	R	A	A	K	A	A	H	E	A	F	.	.	Q	R	W	S	R	T	K	A
Template Known Secondary structure							.	.											S		B					T	T						T	T									T	T	T	T																										.	.						S
Template Predicted Secondary structure							.	.																																																																.	.
Template SS confidence
		10	.	.	.	.			.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.			.	.	80	.	.	.	.	.
		81	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160
Predicted Secondary structure
Query SS confidence
Query Sequence		A	E	R	E	R	I	L	L	R	F	A	D	L	V	E	Q	H	S	E	E	L	A	Q	L	E	T	L	E	Q	G	K	S	I	A	I	S	R	A	F	E	V	G	C	T	L	N	W	M	R	Y	T	A	G	L	T	T	K	I	A	G	K	T	L	D	L	S	I	P	L	P	Q	G	A	R	Y	Q	A	W	T	R
Query Conservation
Alig confidence																																								.																														.	.	.	.	.
Template Conservation																																								.																														.	.	.	.	.
Template Sequence		K	E	R	K	R	Y	L	L	R	I	A	E	L	I	E	K	H	A	D	E	L	A	V	M	E	C	L	D	A	G	Q	V	L	R	I	V	R	A	.	Q	V	A	R	A	A	E	N	F	A	F	Y	A	E	Y	A	E	H	A	M	E	D	R	T	F	P	V	D	R	.	.	.	.	.	D	W	L	Y	Y	T	V
Template Known Secondary structure																		T																						.														T	T	G	G	G	T	T								T	T	.	.	.	.	.	T
Template Predicted Secondary structure																																								.																														.	.	.	.	.
Template SS confidence
		86	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.		.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.						.	.	.	.	.	.	.
		161	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240
Predicted Secondary structure
Query SS confidence
Query Sequence		K	E	P	V	G	V	V	A	G	I	V	P	W	N	F	P	L	M	I	G	M	W	K	V	M	P	A	L	A	A	G	C	S	I	V	I	K	P	S	E	T	T	P	L	T	M	L	R	V	A	E	L	A	S	E	A	G	I	P	D	G	V	F	N	V	V	T	G	S	G	A	V	C	G	A	A	L	T	S	H
Query Conservation
Alig confidence
Template Conservation
Template Sequence		R	V	P	A	G	P	V	G	I	I	T	P	W	N	A	P	L	M	L	S	T	W	R	I	A	P	A	L	A	F	G	N	T	V	V	L	K	P	A	E	W	S	P	F	T	A	T	K	L	A	E	I	L	K	E	A	D	L	P	P	G	V	F	N	L	V	Q	G	F	G	E	E	A	G	A	A	L	V	A	H
Template Known Secondary structure														S	S	S															T	T									T	T	S														T	T			T	T	S								T	T	T
Template Predicted Secondary structure
Template SS confidence
		160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.
		241	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320
Predicted Secondary structure
Query SS confidence
Query Sequence		P	H	V	A	K	I	S	F	T	G	S	T	A	T	G	K	G	I	A	R	T	A	A	D	H	L	T	R	V	T	L	E	L	G	G	K	N	P	A	I	V	L	K	D	A	D	P	Q	W	V	I	E	G	L	M	T	G	S	F	L	N	Q	G	Q	V	C	A	A	S	S	R	I	Y	I	E	A	P	L	F	D
Query Conservation
Alig confidence
Template Conservation
Template Sequence		P	L	V	P	L	L	T	L	T	G	E	T	E	T	G	K	I	V	M	R	N	A	A	D	H	L	K	R	L	S	P	E	L	G	G	K	S	P	A	L	V	F	A	D	A	D	L	E	R	A	L	D	A	V	V	F	Q	I	F	S	F	N	G	E	R	C	T	A	S	S	R	L	L	V	E	E	K	I	F	E
Template Known Secondary structure		T	T								S													G	G	G	T																	T	T	S															G	G	G	G		S	T	T
Template Predicted Secondary structure
Template SS confidence
		240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.
		321	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.									.	.	.	.	.	.	.	.	390	.	.
Predicted Secondary structure																																																															.	.	.	.	.	.	.	.
Query SS confidence																																																															.	.	.	.	.	.	.	.
Query Sequence		T	L	V	S	G	F	E	Q	A	V	K	S	L	Q	V	G	P	G	M	S	P	V	A	Q	I	N	P	L	V	S	R	A	H	C	D	K	V	C	S	F	L	D	D	A	Q	A	Q	Q	A	E	L	I	R	G	S	N	G	P	A	G	E	.	.	.	.	.	.	.	.	G	Y	Y	V	A	P	T	L	V	V	N
Query Conservation																																																															.	.	.	.	.	.	.	.
Alig confidence																																																															.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		D	F	V	G	K	V	V	E	R	A	R	A	I	R	V	G	H	P	L	D	P	E	T	E	V	G	P	L	I	H	P	E	H	L	Q	R	V	L	G	Y	V	E	A	G	K	R	E	G	A	R	L	L	V	G	G	E	R	A	K	T	S	F	R	G	E	D	L	S	R	G	N	Y	L	L	P	T	V	F	V	G
Template Known Secondary structure													T			B			T	T	S	T	T		S	B				S																		T	T								S	B			B		T	T	S		B		T	T	T	T		B
Template Predicted Secondary structure
Template SS confidence
		320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.
		393	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		P	D	A	K	L	R	L	T	R	E	E	V	F	G	P	V	V	N	L	V	R	V	A	D	G	E	E	A	L	Q	L	A	N	D	T	E	Y	G	L	T	A	S	V	W	T	Q	N	L	S	Q	A	L	E	Y	S	D	R	L	Q	A	G	T	V	W	V	N	S	H	T	L	I	D	A	N	L	P	F	G	G	M
Query Conservation
Alig confidence				.
Template Conservation				.
Template Sequence		E	N	.	H	M	K	I	A	Q	E	E	I	F	G	P	V	L	V	A	I	P	F	K	D	E	E	E	A	L	R	K	A	N	D	T	K	Y	G	L	A	A	Y	V	F	T	R	D	L	E	R	A	H	R	L	A	L	E	L	E	A	G	M	V	Y	L	N	S	H	N	V	R	H	L	P	T	P	F	G	G	V
Template Known Secondary structure			T	.	T	S					S				S	S								S	S											S	S			S																			S		S	S					S	S	S					T	T	S		B			S
Template Predicted Secondary structure				.
Template SS confidence
		400	.		.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.
		473	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		K	Q	S	G	T	G	R	D	F	G	P	D	W	L	D	G	W	C	E	T	K	S	V	C	V	R	Y
Query Conservation
Alig confidence
Template Conservation
Template Sequence		K	G	S	G	D	R	R	E	G	G	T	Y	A	L	D	F	Y	T	D	L	K	T	I	A	L	P	L
Template Known Secondary structure		G	G	G	B		S		B	S																		S
Template Predicted Secondary structure
Template SS confidence
		479	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.