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Job DescriptionP80668
Confidence100.00%DateThu Jan 5 12:33:16 GMT 2012
Rank46Aligned Residues367
% Identity15%Templatec1vluB_
PDB info PDB header:oxidoreductaseChain: B: PDB Molecule:gamma-glutamyl phosphate reductase; PDBTitle: crystal structure of gamma-glutamyl phosphate reductase (yor323c) from2 saccharomyces cerevisiae at 2.40 a resolution
Resolution2.29 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   58.60.........70.........80.........90.........100.........110.........120.... ....
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Query Sequence  DVDNAVMSAWRAFVSRRWAGRLPAERERILLRFADLVEQHSEELAQLETLEQGKSIAISRAFEVGCT. . . . . . . . . LNWM
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Template Sequence  SSQQIAKNARKAG. . NILKTISNEGRSDILYKIHDALKANAHAIEEANKIDLAVAKETGLA. DSLLKRLDLFKGDKFEVX
Template Known Secondary structure  ..TTS
TS


.STT
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   3......10..... ....20.........30.........40.........50.........60. ........70.........
 
   129130.........140.........150.........160.........170.........180.........190.........200........
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Query Sequence  RYTAGLTTKIAGKTLDLSIPLPQGARYQAWTRKEPVGVVAGIVPWNFPLMIGMWKVMPALAAGCSIVIKPSETTPLTMLR
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Template Sequence  LQGIKDVAELEDPVGKVKXARELDDGLTLYQVTAPVGVLLVIFESRPEV. . IANITALSIKSGNAAILKGGKESVNTFRE
Template Known Secondary structure  S

SSS
TT




GGG..TTTT

GGG
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   80.........90.........100.........110.........120........ .130.........140.........150.......
 
   209210...... ...220.........230.........240.........250.........260.........270.........280
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Query Sequence  VAELASEA. . . . . . . . GIPDGVFNVVTGSGAVCGAALTSHPHVAKISFTGSTATGKGIARTAADHLTRVTLELGGKNPAI
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Template Sequence  XAKIVNDTIAQFQSETGVPVGSVQLIETD. . . VSDLLDQDEYIDLVVPRGSNALVRKIKDTTK. . . IPVLGHADGICSIY
Template Known Secondary structure  T


TTS



...TT
TTT

S
T
S...S
BTT

S
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   158.160.........170.........180...... ...190.........200.........210....... ..220.........230.
 
   281........290.........300.........310.........320.........330.........340.........350.........360
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Query Sequence  VLKDADPQWVIEGLMTGSFLNQGQVCAASSRIYIEAPLFDTLVSGFEQAVKSLQVGPGMSPVAQINPLVSRAHCDKVCSF
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Template Sequence  LDEDADLIKAKRISLDAKTNNAXETL. . . . . . LINPKFSKWW. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . EVL
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TT





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   234.....240.........250......... 260......... 270..
 
   361........370.........380.........390.........400.........410.........420.........430.........440
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Query Sequence  LDDAQAQQAELIRGSNGPAGEGYYVAPTLVVNPDAKLRLTREEVFGPVVNLVRVADGEEALQLANDTEYGLTASVWTQNL
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Template Sequence  ENLTLEGGVTIHATKDLK. . TAYFDKLNELGKLTEAIQCKTVDADSLDLAAKFVTSTESAIQHINTHSSRHTDAIVTENK
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..T


TT





STTS
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   278.280.........290..... ....300.........310.........320.........330.........340.........350.....
 
   441........450.........460.........470.........480.........490......
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Query Sequence  SQALEYSDRLQAGTVWVNSHTLIDANLPFGGMKQSGTGRDFGPDWLDGWCETKSVC
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Template Sequence  ANAEKFXKGVDSSGVYWNASTRFADG. . . . . . . . . . . . . . . . . . GLDGLVSYQYQI
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SSSS
GGGG

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   366...370.........380.........390. ........400...
 
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No model constructed - rank, confidence too low




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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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