Job Description P39384 Confidence 82.78% Date Thu Jan 5 12:00:17 GMT 2012 Rank 12 Aligned Residues 149 % Identity 14% Template c3pshA_ PDB info PDB header:metal transport Chain: A: PDB Molecule:protein hi_1472; PDBTitle: classification of a haemophilus influenzae abc transporter hi1470/712 through its cognate molybdate periplasmic binding protein mola (mola3 bound to molybdate) Resolution 1.50 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		33	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.			.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.							.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.
Predicted Secondary structure																									.	.																						.	.	.	.	.	.
Query SS confidence																									.	.																						.	.	.	.	.	.
Query Sequence		I	P	L	V	G	T	Y	C	T	F	M	P	Q	E	I	P	M	A	A	G	A	V	V	.	.	V	S	L	C	S	T	S	D	E	T	I	E	E	A	E	K	D	L	P	R	N	.	.	.	.	.	.	L	C	P	L	I	K	S	S	Y	G	F	G	K	T	D	K	C	P	Y	F	Y	F	S	D	L	V	V	G
Query Conservation																									.	.																						.	.	.	.	.	.
Alig confidence						.	.																		.	.																						.	.	.	.	.	.																	.	.	.	.	.	.
Template Conservation						.	.																																																															.	.	.	.	.	.
Template Sequence		N	R	A	V	.	.	V	L	Q	H	Q	T	L	N	I	A	V	Q	L	D	A	T	K	Q	I	V	G	V	L	S	N	W	K	K	Q	L	G	K	N	Y	V	R	L	A	P	E	L	E	N	M	A	M	P	G	D	L	N	S	V	N	I	E	S	L	L	A	L	K	.	.	.	.	.	.	P	D	V	V	F	V
Template Known Secondary structure		S				.	.													T	T		G	G	G						T	T							T	T	G	G	G	T		G	G	G	G	G		B			B		S	S		B								T		.	.	.	.	.	.		S
Template Predicted Secondary structure						.	.																																																															.	.	.	.	.	.
Template SS confidence
		40	.	.	.			.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.							.	.	.	.	110	.
		105	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120		.	.	.	.	.	.	.	.	.	130	.	.	.										.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.
Predicted Secondary structure																		.														.	.	.	.	.	.	.	.	.
Query SS confidence																		.														.	.	.	.	.	.	.	.	.
Query Sequence		E	T	T	C	D	G	K	K	K	M	Y	E	Y	M	A	E	.	F	K	P	V	H	V	M	Q	L	P	N	S	V	.	.	.	.	.	.	.	.	.	K	D	D	A	S	R	A	L	W	K	A	E	M	L	R	L	Q	K	T	V	E	E	R	F	G	H	E	I	S	E	D	A	L	R	D	A	I	A	L	K	N
Query Conservation																		.														.	.	.	.	.	.	.	.	.
Alig confidence								.	.									.														.	.	.	.	.	.	.	.	.																												.	.	.
Template Conservation								.	.																																																											.	.	.
Template Sequence		T	N	Y	A	P	S	.	.	E	M	I	K	Q	I	S	D	V	N	I	P	V	V	A	I	S	L	R	T	G	E	V	G	E	K	G	K	L	N	P	T	L	T	D	E	D	K	A	Y	N	D	G	L	K	Q	G	I	E	L	I	A	E	V	F	E	K	K	.	.	.	Q	Q	G	D	E	L	V	K	A	A	F
Template Known Secondary structure			T	T				.	.								T	T	T								S			S		G	G	G	T	T		S	S				T	T																					T			.	.	.
Template Predicted Secondary structure								.	.																																																											.	.	.
Template SS confidence
		112	.	.	.	.	.			.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.				.	.	.	.	180	.	.	.	.	.	.
		175	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	E	R	R	A	L	A	N	F	Y	H	L	G	Q	L	N	P	P	A	L
Query Conservation
Alig confidence
Template Conservation
Template Sequence		A	N	R	K	L	L	A	D	R	L	G	D	V	S	A	D	K	R	V	R
Template Known Secondary structure		T	T									T	T			T	T	T	S
Template Predicted Secondary structure
Template SS confidence
		187	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions