Job Description P39384 Confidence 79.35% Date Thu Jan 5 12:00:17 GMT 2012 Rank 14 Aligned Residues 154 % Identity 14% Template c3pdiB_ PDB info PDB header:protein binding Chain: B: PDB Molecule:nitrogenase mofe cofactor biosynthesis protein nifn; PDBTitle: precursor bound nifen Resolution 2.40 Å

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		108	.	110	.	.	.	.	.	.	.	.	.	120			.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.
Predicted Secondary structure															.	.
Query SS confidence															.	.
Query Sequence		C	D	G	K	K	K	M	Y	E	Y	M	A	E	.	.	F	K	P	V	H	V	M	Q	L	P	N	S	V	K	D	D	A	S	R	A	L	W	K	A	E	M	L	R	L	Q	K	T	V	E	E	R	F	G	H	E	I	S	E	D	A	L	R	D	A	I	A	L	K	N	R	E	R	R	A	L	A	N	F	Y	H
Query Conservation															.	.
Alig confidence															.	.													.	.	.	.	.	.	.	.	.	.																						.
Template Conservation																													.	.	.	.	.	.	.	.	.	.																						.
Template Sequence		G	Q	S	L	A	G	A	A	D	A	L	A	E	R	T	G	V	P	D	R	R	F	G	M	L	Y	G	.	.	.	.	.	.	.	.	.	.	L	D	A	V	D	A	W	L	M	A	L	A	E	I	S	G	N	P	V	P	D	.	R	Y	K	R	Q	R	A	Q	L	Q	D	A	M	L	D	T	H	F	M	L	S
Template Known Secondary structure		S	G	G	G											S										S			.	.	.	.	.	.	.	.	.	.																S	S					.																					T
Template Predicted Secondary structure																													.	.	.	.	.	.	.	.	.	.																						.
Template SS confidence
		244	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270											.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.		.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.
		186	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	G	Q	L	N	P	P	A	L	S	G	S	D	I	L	K	V	V	Y	G	A	T	F	R	F	D	K	E	A	L	I	N	E	L	D	A	M	T	A	R	V	R	Q	Q	W	E	E	G	Q	R	L	D	P	R	P	R	I	L	I	T	G	C	P	I	G	G	A	A	E	K	V	V	R	A	I	E	E	N	G	G
Query Conservation
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.									.	.
Template Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.									.	.
Template Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S	A	R	T	A	I	A	A	.	.	D	P	D	L	L	L	G	F	D	A	L	L	R	S	M	G	A
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T								.	.														T	T	T
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.									.	.
Template SS confidence
																																																							313	.	.	.	.	.	.	320			.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.
		266	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		W	V	V	G	Y	E	N	C	T	G	A	K	A	T	E	Q	C	V	A	E	T	G	D	V	Y	D	A	L	A	D	K	Y	L	A	I	G	C	S	C	V	S	P	N	D	Q	R	L	K	M	L	S	Q	M	V	E	E	Y	Q	V	D	G	V	V	D	V	I	L	Q	A	C	H	T	Y	A	V	E	S	L	A	I
Query Conservation
Alig confidence																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																															.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																															.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		H	T	V	A	A	V	V	P	A	R	A	A	A	L	V	D	S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	P	L	P	S	V	R	V	G	D	L	E	D	L	E	H	A	A	R	A	G	Q	A	Q	L	V	I	G	N	S	H	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure									S	S			S			T	T	T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T	S	S					S													T		S						T	T	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																															.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		338	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.																					.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.
		346	.	.	.	350	.	.	.	.	.	.	.	.	.	360
Predicted Secondary structure
Query SS confidence
Query Sequence		K	R	H	V	R	Q	Q	H	N	I	P	Y	I	A	I
Query Conservation
Alig confidence
Template Conservation
Template Sequence		A	L	A	S	A	R	R	L	G	V	P	L	L	R	A
Template Known Secondary structure									T	T
Template Predicted Secondary structure
Template SS confidence
		385	.	.	.	.	390	.	.	.	.	.	.	.	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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