Job Description P39384 Confidence 53.80% Date Thu Jan 5 12:00:17 GMT 2012 Rank 40 Aligned Residues 160 % Identity 20% Template c3opyB_ PDB info PDB header:transferase Chain: B: PDB Molecule:6-phosphofructo-1-kinase beta-subunit; PDBTitle: crystal structure of pichia pastoris phosphofructokinase in the t-2 state Resolution 3.05 Å

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		214	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.			.	.	.	.	.	.	.	250	.	.	.	.				.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.
Predicted Secondary structure																															.	.													.	.	.
Query SS confidence																															.	.													.	.	.
Query Sequence		A	L	I	N	E	L	D	A	M	T	A	R	V	R	Q	Q	W	E	E	G	Q	R	L	D	P	R	P	R	I	.	.	L	I	T	G	C	P	I	G	G	A	A	E	.	.	.	K	V	V	R	A	I	E	E	N	G	G	W	V	V	G	Y	E	N	C	T	G	A	K	A	T	E	Q	C	V	A	E	T	G	D
Query Conservation																															.	.													.	.	.
Alig confidence																															.	.													.	.	.																			.	.
Template Conservation																																																																		.	.
Template Sequence		E	F	V	E	H	M	K	N	F	I	S	T	N	S	D	H	V	P	P	S	L	P	L	E	K	R	K	K	I	A	I	I	N	V	G	A	P	A	G	G	M	N	S	A	V	Y	S	M	A	T	Y	C	M	S	R	G	H	V	P	Y	A	I	H	N	.	.	G	F	S	G	L	A	R	H	E	S	V	R	S	I
Template Known Secondary structure																		S			S	S		G	G	G										S	S			T	T																T							T	T	.	.
Template Predicted Secondary structure																																																																		.	.
Template SS confidence
		545	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.			.	610	.	.	.	.	.	.	.	.	.	620	.	.
		289	290	.	.	.	.	.	.	.	.					.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.							.	.	.	.	.	.
Predicted Secondary structure												.	.	.	.																																																							.	.	.	.	.	.
Query SS confidence												.	.	.	.																																																							.	.	.	.	.	.
Query Sequence		V	Y	D	A	L	A	D	K	Y	L	.	.	.	.	A	I	G	C	S	C	V	S	P	N	D	Q	R	L	K	M	L	S	Q	M	V	E	E	Y	Q	V	D	G	V	V	D	V	I	L	Q	A	C	H	T	Y	A	V	E	S	L	A	I	K	R	H	V	R	Q	Q	.	.	.	.	.	.	H	N	I	P	Y	I
Query Conservation												.	.	.	.																																																							.	.	.	.	.	.
Alig confidence												.	.	.	.																																		.	.	.	.	.	.	.															.	.	.	.	.	.
Template Conservation																																																	.	.	.	.	.	.	.
Template Sequence		N	W	L	D	I	E	G	W	G	S	L	G	G	S	E	I	G	T	N	R	T	L	P	N	D	A	D	I	G	M	I	A	Y	F	F	E	K	Y	G	F	D	G	L	I	L	V	G	.	.	.	.	.	.	.	G	F	E	A	F	I	S	L	H	Q	L	E	R	A	R	I	N	Y	P	S	L	R	I	P	L	V
Template Known Secondary structure			T	T	T	T	T	T	G	G	G			S		S	S							T	T	T	S												T	T		S							.	.	.	.	.	.	.	S													G	G	G	T		G	G	G		S
Template Predicted Secondary structure																																																	.	.	.	.	.	.	.
Template SS confidence
		624	.	.	.	.	.	630	.	.	.	.	.	.	.	.	.	640	.	.	.	.	.	.	.	.	.	650	.	.	.	.	.	.	.	.	.	660	.	.	.	.	.	.	.	.	.	670								.	.	.	.	.	.	.	.	.	680	.	.	.	.	.	.	.	.	.	690	.	.	.	.	.	.
		359	360							.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.
Predicted Secondary structure				.	.	.	.	.	.
Query SS confidence				.	.	.	.	.	.
Query Sequence		A	I	.	.	.	.	.	.	E	T	D	Y	S	T	S	D	V	G	Q	L	S	T	R	V	A	A	F	I	E	M	L
Query Conservation				.	.	.	.	.	.
Alig confidence				.	.	.	.	.	.											.
Template Conservation																				.
Template Sequence		L	I	P	A	T	I	S	N	N	V	P	G	T	E	Y	S	L	G	.	S	D	T	C	L	N	S	F	M	E	Y	C
Template Known Secondary structure					B		S	S				T	T		S			B	T	.
Template Predicted Secondary structure																				.
Template SS confidence
		697	.	.	700	.	.	.	.	.	.	.	.	.	710	.	.	.	.		.	.	.	.	.	720	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions