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Job DescriptionP39384
Confidence100.00%DateThu Jan 5 12:00:17 GMT 2012
Rank1Aligned Residues366
% Identity22%Templatec3o3nB_
PDB info PDB header:lyaseChain: B: PDB Molecule:beta-subunit 2-hydroxyacyl-coa dehydratase; PDBTitle: (r)-2-hydroxyisocaproyl-coa dehydratase in complex with its substrate2 (r)-2-hydroxyisocaproyl-coa
Resolution2.30 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   7..10.........20......... 30.........40.........50.........60.........70.........80.....
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Query Sequence  LPAIFDQFSEARQTGFLTVMDLK. ERGIPLVGTYCTFMPQEIPMAAGAVVVSLCSTSDETIEEAEKDLPRNLCPLIKSSY
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Template Sequence  MEAILSKMKEVVENPNAAVKKYKSETGKKAIGCFPVYCPEEIIHAAGMLPVGIWGGQTE. LDLAKQYFPAFACSIMQSCL
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SGGGGT

TTS
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   1........10.........20.........30.........40.........50......... 60.........70.........
 
   86...90.........100.........110.........120 .........130.........140.........150.........160..
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Query Sequence  GFGKTDKCPYFYFSDLVVGETTCDGKKKMYEYMAE. . . FKPVHVMQLPNSVKDDASRALWKAEMLRLQKTVEERFGHEIS
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Template Sequence  EYGLKGAYDE. . . LSGVIIPGMCDTLICLGQNWKSAVPHIKYISLVHPQNRKLEAGVKYLISEYKGVKRELEEICGYEIE
Template Known Secondary structure  TTTTTT...
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   80......... 90.........100.........110.........120.........130.........140.........150......
 
   163......170.........180.........190.........200.........210.........220.........230.........240..
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Query Sequence  EDALRDAIALKNRERRALANFYHLGQLNPPALSGSDILKVVYGATFRFDKEALINELDAMTARVRQQWEEGQRLDPRPRI
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Template Sequence  EAKIHESIEVYNEHRKTMRDFVEVAYKHSNTIKPSIRSLVIKSGFFM. RKEEHTELVKDLIAKLNAMPEEVCS. . . GKKV
Template Known Secondary structure  BTTTS
GGGSS.
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   157..160.........170.........180.........190.........200... ......210.........220........ .230..
 
   243......250.........260.........270.........280.........290.........300. ... .....310.........320
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Query Sequence  LITGCPIGGAAEKVVRAIEENGGWVVGYENCTGAKATEQCVAETGDVYDALADKYLAIG. CSC. VSPNDQRLKMLSQMVE
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Template Sequence  LLTGILA. . DSKDILDILEDNNISVVADDLAQETRQFRTDVPAGDDALERLARQWSNIEGCSLAYDPKKKRGSLIVDEVK
Template Known Secondary structure  S

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   233...... 240.........250.........260.........270.........280.........290.........300.........310
 
   321........330.........340.........350.........360.........370.........380...
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Query Sequence  EYQVDGVVDVILQACHTYAVESLAIKRHVRQQHNIPYIAIETDYSTSDVGQLSTRVAAFIEML
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Template Sequence  KKDIDGVIFCMMKFCDPEEYDYPLVRKDI. EDSGIPTLYVEIDQQTQNNEQARTRIQTFAEMM
Template Known Secondary structure  TT

TT
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   311........320.........330......... 340.........350.........360.........370..
 
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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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