Job Description P39384 Confidence 100.00% Date Thu Jan 5 12:00:17 GMT 2012 Rank 1 Aligned Residues 366 % Identity 22% Template c3o3nB_ PDB info PDB header:lyase Chain: B: PDB Molecule:beta-subunit 2-hydroxyacyl-coa dehydratase; PDBTitle: (r)-2-hydroxyisocaproyl-coa dehydratase in complex with its substrate2 (r)-2-hydroxyisocaproyl-coa Resolution 2.30 Å

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		7	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.		30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.
Predicted Secondary structure																									.
Query SS confidence																									.
Query Sequence		L	P	A	I	F	D	Q	F	S	E	A	R	Q	T	G	F	L	T	V	M	D	L	K	.	E	R	G	I	P	L	V	G	T	Y	C	T	F	M	P	Q	E	I	P	M	A	A	G	A	V	V	V	S	L	C	S	T	S	D	E	T	I	E	E	A	E	K	D	L	P	R	N	L	C	P	L	I	K	S	S	Y
Query Conservation																									.
Alig confidence																									.																																				.
Template Conservation																																																													.
Template Sequence		M	E	A	I	L	S	K	M	K	E	V	V	E	N	P	N	A	A	V	K	K	Y	K	S	E	T	G	K	K	A	I	G	C	F	P	V	Y	C	P	E	E	I	I	H	A	A	G	M	L	P	V	G	I	W	G	G	Q	T	E	.	L	D	L	A	K	Q	Y	F	P	A	F	A	C	S	I	M	Q	S	C	L
Template Known Secondary structure														S																						S	S										T	T										S			.		S	G	G	G	G	T			T	T	S
Template Predicted Secondary structure																																																													.
Template SS confidence
		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.		60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.
		86	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120				.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.
Predicted Secondary structure																																					.	.	.
Query SS confidence																																					.	.	.
Query Sequence		G	F	G	K	T	D	K	C	P	Y	F	Y	F	S	D	L	V	V	G	E	T	T	C	D	G	K	K	K	M	Y	E	Y	M	A	E	.	.	.	F	K	P	V	H	V	M	Q	L	P	N	S	V	K	D	D	A	S	R	A	L	W	K	A	E	M	L	R	L	Q	K	T	V	E	E	R	F	G	H	E	I	S
Query Conservation																																					.	.	.
Alig confidence												.	.	.																							.	.	.
Template Conservation												.	.	.
Template Sequence		E	Y	G	L	K	G	A	Y	D	E	.	.	.	L	S	G	V	I	I	P	G	M	C	D	T	L	I	C	L	G	Q	N	W	K	S	A	V	P	H	I	K	Y	I	S	L	V	H	P	Q	N	R	K	L	E	A	G	V	K	Y	L	I	S	E	Y	K	G	V	K	R	E	L	E	E	I	C	G	Y	E	I	E
Template Known Secondary structure						T	T	T	T	T	T	.	.	.		S							S	S															T	T	S									S		T	T	S																							S	S
Template Predicted Secondary structure												.	.	.
Template SS confidence
		80	.	.	.	.	.	.	.	.	.				90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.
		163	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	D	A	L	R	D	A	I	A	L	K	N	R	E	R	R	A	L	A	N	F	Y	H	L	G	Q	L	N	P	P	A	L	S	G	S	D	I	L	K	V	V	Y	G	A	T	F	R	F	D	K	E	A	L	I	N	E	L	D	A	M	T	A	R	V	R	Q	Q	W	E	E	G	Q	R	L	D	P	R	P	R	I
Query Conservation
Alig confidence																																																	.																										.	.	.
Template Conservation																																																	.																										.	.	.
Template Sequence		E	A	K	I	H	E	S	I	E	V	Y	N	E	H	R	K	T	M	R	D	F	V	E	V	A	Y	K	H	S	N	T	I	K	P	S	I	R	S	L	V	I	K	S	G	F	F	M	.	R	K	E	E	H	T	E	L	V	K	D	L	I	A	K	L	N	A	M	P	E	E	V	C	S	.	.	.	G	K	K	V
Template Known Secondary structure																													B	T	T	T	S											G	G	G	S	S	.																		T	S			B			S	.	.	.	S
Template Predicted Secondary structure																																																	.																										.	.	.
Template SS confidence
		157	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.		.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.				.	230	.	.
		243	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.		.	.	.		.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320
Predicted Secondary structure																																																													.				.
Query SS confidence																																																													.				.
Query Sequence		L	I	T	G	C	P	I	G	G	A	A	E	K	V	V	R	A	I	E	E	N	G	G	W	V	V	G	Y	E	N	C	T	G	A	K	A	T	E	Q	C	V	A	E	T	G	D	V	Y	D	A	L	A	D	K	Y	L	A	I	G	.	C	S	C	.	V	S	P	N	D	Q	R	L	K	M	L	S	Q	M	V	E
Query Conservation																																																													.				.
Alig confidence									.	.																																																			.				.
Template Conservation									.	.
Template Sequence		L	L	T	G	I	L	A	.	.	D	S	K	D	I	L	D	I	L	E	D	N	N	I	S	V	V	A	D	D	L	A	Q	E	T	R	Q	F	R	T	D	V	P	A	G	D	D	A	L	E	R	L	A	R	Q	W	S	N	I	E	G	C	S	L	A	Y	D	P	K	K	K	R	G	S	L	I	V	D	E	V	K
Template Known Secondary structure						S			.	.												T	T									T	T	T	G	G	G	T	S	S						S															S		T	T	S			T	T		T
Template Predicted Secondary structure									.	.
Template SS confidence
		233	.	.	.	.	.	.			240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310
		321	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	Y	Q	V	D	G	V	V	D	V	I	L	Q	A	C	H	T	Y	A	V	E	S	L	A	I	K	R	H	V	R	Q	Q	H	N	I	P	Y	I	A	I	E	T	D	Y	S	T	S	D	V	G	Q	L	S	T	R	V	A	A	F	I	E	M	L
Query Conservation
Alig confidence																															.
Template Conservation																															.
Template Sequence		K	K	D	I	D	G	V	I	F	C	M	M	K	F	C	D	P	E	E	Y	D	Y	P	L	V	R	K	D	I	.	E	D	S	G	I	P	T	L	Y	V	E	I	D	Q	Q	T	Q	N	N	E	Q	A	R	T	R	I	Q	T	F	A	E	M	M
Template Known Secondary structure			T	T										T	T																.			T	T										S	S																		T
Template Predicted Secondary structure																															.
Template SS confidence
		311	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.		340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions