Job Description P39384 Confidence 100.00% Date Thu Jan 5 12:00:17 GMT 2012 Rank 2 Aligned Residues 362 % Identity 17% Template c3o3nA_ PDB info PDB header:lyase Chain: A: PDB Molecule:alpha-subunit 2-hydroxyisocaproyl-coa dehydratase; PDBTitle: (r)-2-hydroxyisocaproyl-coa dehydratase in complex with its substrate2 (r)-2-hydroxyisocaproyl-coa Resolution 2.30 Å

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		14	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.										.	60	.	.	.	.	.	.	.	.	.	70	.	.		.	.	.	.	.	.	.	80	.	.	.
Predicted Secondary structure																																															.	.	.	.	.	.	.	.	.															.
Query SS confidence																																															.	.	.	.	.	.	.	.	.															.
Query Sequence		F	S	E	A	R	Q	T	G	F	L	T	V	M	D	L	K	E	R	G	I	P	L	V	G	T	Y	C	T	F	M	P	Q	E	I	P	M	A	A	G	A	V	V	V	S	L	.	.	.	.	.	.	.	.	.	C	S	T	S	D	E	T	I	E	E	A	E	K	D	.	L	P	R	N	L	C	P	L	I	K	S
Query Conservation																																															.	.	.	.	.	.	.	.	.															.
Alig confidence																							.																								.	.	.	.	.	.	.	.	.															.
Template Conservation																							.
Template Sequence		I	N	D	L	L	A	E	Q	Y	A	N	A	F	K	A	K	E	E	G	R	P	.	V	G	W	S	T	S	V	F	P	Q	E	L	A	E	V	F	D	L	N	V	L	Y	P	E	N	Q	A	A	G	V	A	A	K	K	G	S	L	E	L	C	E	I	A	E	S	K	G	Y	S	I	D	L	C	A	Y	A	R	T
Template Known Secondary structure																			T	T			.						T	T	S		T					T	T	T																T	T												T	T			T	T	S
Template Predicted Secondary structure																							.
Template SS confidence
		11	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.		.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.
		84	.	.	.	.	.	90	.	.	.	.	.			.	.	.	.	100	.	.	.	.	.	.	.		.	.	110	.	.	.	.	.	.	.	.	.	120			.	.	.	.	.	.	.	.	.	130	.	.	.	.	.				.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.
Predicted Secondary structure														.	.													.														.	.																.	.	.
Query SS confidence														.	.													.														.	.																.	.	.
Query Sequence		S	Y	G	F	G	K	T	D	K	C	P	Y	.	.	F	Y	F	S	D	L	V	V	G	E	T	T	.	C	D	G	K	K	K	M	Y	E	Y	M	A	E	.	.	F	K	P	V	H	V	M	Q	L	P	N	S	V	K	D	.	.	.	D	A	S	R	A	L	W	K	A	E	M	L	R	L	Q	K	T	V	E	E
Query Conservation														.	.													.														.	.																.	.	.
Alig confidence														.	.													.														.	.																.	.	.
Template Conservation
Template Sequence		N	F	G	L	L	E	N	G	G	C	E	A	L	D	M	P	A	P	D	F	L	L	C	C	N	N	I	C	N	Q	V	I	K	W	Y	E	N	I	S	R	E	L	D	I	P	L	I	M	I	D	T	T	F	N	N	E	D	E	V	T	Q	S	R	I	D	Y	I	K	A	Q	F	E	E	A	I	K	Q	L	E	I
Template Known Secondary structure									T			S	S	S						S						T	T	S		S														T											B		S	S	S
Template Predicted Secondary structure
Template SS confidence
		90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.
		156	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190		.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.
Predicted Secondary structure																																					.
Query SS confidence																																					.
Query Sequence		R	F	G	H	E	I	S	E	D	A	L	R	D	A	I	A	L	K	N	R	E	R	R	A	L	A	N	F	Y	H	L	G	Q	L	N	.	P	P	A	L	S	G	S	D	I	L	K	V	V	Y	G	A	T	F	R	F	D	K	E	A	L	I	N	E	L	D	A	M	T	A	R	V	R	Q	Q	W	E	E	G	Q
Query Conservation																																					.
Alig confidence																																					.
Template Conservation
Template Sequence		I	S	G	K	K	F	D	P	K	K	F	E	E	V	M	K	I	S	A	E	N	G	R	L	W	K	Y	S	M	S	L	P	A	D	S	S	P	S	P	M	N	G	F	D	L	F	T	Y	M	A	V	I	V	C	A	R	G	K	K	E	T	T	E	A	F	K	L	L	I	E	E	L	E	D	N	M	K	T	G	K
Template Known Secondary structure				T																										T	T	G	G	G	S	S	S	S		S	S		T	T													T	T																				T	T	T
Template Predicted Secondary structure
Template SS confidence
		170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.
		235	.				.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.
Predicted Secondary structure				.	.	.
Query SS confidence				.	.	.
Query Sequence		R	L	.	.	.	D	P	R	P	R	I	L	I	T	G	C	P	I	G	G	A	A	E	K	V	V	R	A	I	E	E	N	G	G	W	V	V	G	Y	E	N	C	T	G	A	K	A	T	E	Q	C	V	A	E	T	G	D	V	Y	D	A	L	A	D	K	Y	L	A	I	G	C	S	C	V	S	P	N	D	Q	R
Query Conservation				.	.	.
Alig confidence				.	.	.																																										.	.	.	.	.																		.	.
Template Conservation																																																.	.	.	.	.																		.	.
Template Sequence		S	S	F	R	G	E	E	K	Y	R	I	M	M	E	G	I	P	C	W	P	Y	I	G	Y	K	M	K	T	L	A	K	F	G	V	N	M	T	G	S	V	Y	P	H	A	W	A	.	.	.	.	.	L	Q	Y	E	V	N	D	L	D	G	M	A	V	A	Y	S	T	.	.	M	F	N	N	V	N	L	D	R	M
Template Known Secondary structure			S	S		S										S				G	G	G											T	T							S					T	T	.	.	.	.	.					T	T											T	.	.	S	G	G	G	B
Template Predicted Secondary structure																																																.	.	.	.	.																		.	.
Template SS confidence
		250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.						.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.			.	.	.	.	.	.	.	320	.	.
		312	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.				.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.
Predicted Secondary structure																																																				.	.	.
Query SS confidence																																																				.	.	.
Query Sequence		L	K	M	L	S	Q	M	V	E	E	Y	Q	V	D	G	V	V	D	V	I	L	Q	A	C	H	T	Y	A	V	E	S	L	A	I	K	R	H	V	R	Q	Q	H	N	I	P	Y	I	A	I	E	.	.	.	T	D	Y	S	T	S	D	V	G	Q	L	S	T	R	V	A	A	F	I	E	M	L
Query Conservation																																																				.	.	.
Alig confidence																																																				.	.	.
Template Conservation
Template Sequence		T	K	Y	R	V	D	S	L	V	E	G	K	C	D	G	A	F	Y	H	M	N	R	S	C	K	L	M	S	L	I	Q	Y	E	M	Q	R	R	A	A	E	E	T	G	L	P	Y	A	G	F	D	G	D	Q	A	D	P	R	A	F	T	N	A	Q	F	E	T	R	I	Q	G	L	V	E	V	M
Template Known Secondary structure												T	T		S								S	S						T	T																							S	S		T	T	S
Template Predicted Secondary structure
Template SS confidence
		323	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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