Job Description P39384 Confidence 51.94% Date Thu Jan 5 12:00:17 GMT 2012 Rank 42 Aligned Residues 106 % Identity 15% Template c3ke8A_ PDB info PDB header:oxidoreductase Chain: A: PDB Molecule:4-hydroxy-3-methylbut-2-enyl diphosphate PDBTitle: crystal structure of isph:hmbpp-complex Resolution 1.70 Å

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		208	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.			270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.
Predicted Secondary structure																																																																.	.
Query SS confidence																																																																.	.
Query Sequence		F	R	F	D	K	E	A	L	I	N	E	L	D	A	M	T	A	R	V	R	Q	Q	W	E	E	G	Q	R	L	D	P	R	P	R	I	L	I	T	G	C	P	I	G	G	A	A	E	K	V	V	R	A	I	E	E	N	G	G	W	V	V	G	.	.	Y	E	N	C	T	G	A	K	A	T	E	Q	C	V	A	E
Query Conservation																																																																.	.
Alig confidence																					.	.	.	.	.	.	.	.	.	.	.	.									.	.																						.	.
Template Conservation																					.	.	.	.	.	.	.	.	.	.	.	.									.	.
Template Sequence		F	C	A	G	V	D	R	A	I	S	I	V	E	N	A	L	A	I	Y	.	.	.	.	.	.	.	.	.	.	.	.	G	A	P	I	Y	V	R	H	.	.	E	V	V	H	N	R	Y	V	V	D	S	L	R	E	R	G	A	I	F	I	E	Q	I	S	E	V	P	D	G	A	I	L	I	F	S	A	H	G	V
Template Known Secondary structure																					.	.	.	.	.	.	.	.	.	.	.	.		S						S	.	.		S	S	S												T					S	S	G	G	G	S		T	T							T	T
Template Predicted Secondary structure																					.	.	.	.	.	.	.	.	.	.	.	.									.	.
Template SS confidence
		11	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.													30	.	.	.	.	.	.	.			.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.
		286	.	.	.	290	.	.	.	.	.	.	.	.	.	300				.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.			.	.	.	330	.	.	.	.
Predicted Secondary structure																	.	.	.																											.	.
Query SS confidence																	.	.	.																											.	.
Query Sequence		T	G	D	V	Y	D	A	L	A	D	K	Y	L	A	I	.	.	.	G	C	S	C	V	S	P	N	D	Q	R	L	K	M	L	S	Q	M	V	E	E	Y	Q	V	D	G	.	.	V	V	D	V	I	L	Q	A
Query Conservation																	.	.	.																											.	.
Alig confidence																	.	.	.					.	.	.	.	.	.	.																.	.
Template Conservation																								.	.	.	.	.	.	.
Template Sequence		S	Q	A	V	R	N	E	A	K	S	R	D	L	T	V	F	D	A	T	C	P	L	.	.	.	.	.	.	.	V	T	K	V	H	M	E	V	A	R	A	S	R	R	G	E	E	S	I	L	I	G	H	A	G
Template Known Secondary structure												T	T											.	.	.	.	.	.	.														T	T							S		T	T
Template Predicted Secondary structure																								.	.	.	.	.	.	.
Template SS confidence
		77	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.								.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions