Job Description P39384 Confidence 31.10% Date Thu Jan 5 12:00:17 GMT 2012 Rank 80 Aligned Residues 132 % Identity 15% Template c3hjtB_ PDB info PDB header:cell adhesion, transport protein Chain: B: PDB Molecule:lmb; PDBTitle: structure of laminin binding protein (lmb) of streptococcus2 agalactiae a bifunctional protein with adhesin and metal3 transporting activity Resolution 2.50 Å

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		205	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	A	T	F	R	F	D	K	E	A	L	I	N	E	L	D	A	M	T	A	R	V	R	Q	Q	W	E	E	G	Q	R	L	D	P	R	P	R	I	L	I	T	G	C	P	I	G	G	A	A	E	K	V	V	R	A	I	E	E	N	G	G	W	V	V	G	Y	E	N	C	T	G	A	K	A	T	E	Q	C	V	A
Query Conservation
Alig confidence																																	.	.	.	.	.													.	.	.	.	.	.															.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																	.	.	.	.	.													.	.	.	.	.	.															.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		K	D	S	Y	T	K	K	A	K	A	F	K	K	E	A	E	Q	L	T	E	E	Y	T	Q	K	F	K	K	V	R	S	.	.	.	.	.	K	T	F	V	T	Q	H	T	A	F	S	Y	.	.	.	.	.	.	L	A	K	R	F	G	L	K	Q	L	G	I	S	G	.	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure																											G	G	G		S		.	.	.	.	.								S					.	.	.	.	.	.					T	T									.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																	.	.	.	.	.													.	.	.	.	.	.															.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		169	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.						200	.	.	.	.	.	.	.	.	.	210	.							.	.	.	.	.	.	.	.	220	.	.	.	.	.
		285	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	T	G	D	V	Y	D	A	L	A	D	K	Y	L	A	I	G	C	S	C	V	S	P	N	D	Q	R	L	K	M	L	S	Q	M	V	E	E	Y	Q	V	D	G	V	V	D	V	I	L	Q	A	C	H	T	Y	A	V	E	S	L	A	I	K	R	H	V	R	Q	Q	H	N	I	P	Y	I	A	I	E	T	D	Y
Query Conservation
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																														.	.	.	.	.	.	.	.
Template Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																														.	.	.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	I	S	P	E	Q	E	P	S	P	R	Q	L	K	E	I	Q	D	F	V	K	E	Y	N	V	K	T	I	F	A	.	.	.	.	.	.	.	.	E	D	N	V	N	P	K	I	A	H	A	I	A	K	S	T	G	A	K	V	K	T	L	S	P	L	E
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S	S	T	T	S																	T	T							.	.	.	.	.	.	.	.	B	T	T	B													T									S
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																														.	.	.	.	.	.	.	.
Template SS confidence
																		226	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.									.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.
		365	.	.	.	.	370	.						.	.	.	.	.	.	.	.	380	.	.	.
Predicted Secondary structure									.	.	.	.	.
Query SS confidence									.	.	.	.	.
Query Sequence		S	T	S	D	V	G	Q	.	.	.	.	.	L	S	T	R	V	A	A	F	I	E	M	L
Query Conservation									.	.	.	.	.
Alig confidence									.	.	.	.	.
Template Conservation
Template Sequence		A	A	P	S	G	N	K	T	Y	L	E	N	L	R	A	N	L	E	V	L	Y	Q	Q	L
Template Known Secondary structure		S			S	S
Template Predicted Secondary structure
Template SS confidence
		282	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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