Job Description P39384 Confidence 35.06% Date Thu Jan 5 12:00:17 GMT 2012 Rank 66 Aligned Residues 127 % Identity 14% Template c3eiwA_ PDB info PDB header:transport protein Chain: A: PDB Molecule:htsa protein; PDBTitle: crystal structure of staphylococcus aureus lipoprotein, htsa Resolution 1.60 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		33	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.						.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.
Predicted Secondary structure																																			.	.	.	.	.
Query SS confidence																																			.	.	.	.	.
Query Sequence		I	P	L	V	G	T	Y	C	T	F	M	P	Q	E	I	P	M	A	A	G	A	V	V	V	S	L	C	S	T	S	D	E	T	.	.	.	.	.	I	E	E	A	E	K	D	L	P	R	N	L	C	P	L	I	K	S	S	Y	G	F	G	K	T	D	K	C	P	Y	F	Y	F	S	D	L	V	V	G	E	T	T
Query Conservation																																			.	.	.	.	.
Alig confidence						.	.																												.	.	.	.	.										.																		.	.	.	.	.	.
Template Conservation						.	.																																										.																		.	.	.	.	.	.
Template Sequence		K	R	I	V	.	.	V	L	E	Y	S	F	A	D	A	L	A	A	L	D	V	K	P	V	G	I	A	D	D	G	K	K	K	R	I	I	K	P	V	R	E	K	I	G	D	Y	T	.	S	V	G	T	R	K	Q	P	N	L	E	E	I	S	K	L	K	.	.	.	.	.	.	P	D	L	I	I	A	D	S	S
Template Known Secondary structure						.	.		S	S										T	T				S					T	T		G	G	G	S										S			.			B		S	S	S	B								T		.	.	.	.	.	.		S						T	T
Template Predicted Secondary structure						.	.																																										.																		.	.	.	.	.	.
Template SS confidence
		55	.	.	.			.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.		100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.							.	.	.	120	.	.	.	.	.
		108	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		C	D	G	K	K	K	M	Y	E	Y	M	A	E	F	K	P	V	H	V	M	Q	L	P	N	S	V	K	D	D	A	S	R	A	L	W	K	A	E	M	L	R	L	Q	K	T	V	E	E	R	F	G	H	E	I	S	E	D	A	L	R	D	A	I	A	L	K	N	R	E	R	R	A	L	A	N
Query Conservation
Alig confidence					.	.																						.	.	.	.	.	.	.	.	.																			.	.	.
Template Conservation					.	.																						.	.	.	.	.	.	.	.	.																			.	.	.
Template Sequence		R	H	K	.	.	G	I	N	K	E	L	N	K	I	A	P	T	L	S	L	K	S	F	D	G	D	.	.	.	.	.	.	.	.	.	Y	K	Q	N	I	N	S	F	K	T	I	A	K	A	L	N	K	E	.	.	.	K	E	G	E	K	R	L	A	E	H	D	K	L	I	N	K	Y	K	D
Template Known Secondary structure		T	T	T	.	.	T	T								S							S	T	T			.	.	.	.	.	.	.	.	.															T	T			.	.	.
Template Predicted Secondary structure					.	.																						.	.	.	.	.	.	.	.	.																			.	.	.
Template SS confidence
		126	.	.			.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.										150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.				.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions