Job Description P39384 Confidence 31.97% Date Thu Jan 5 12:00:17 GMT 2012 Rank 75 Aligned Residues 156 % Identity 14% Template c3aerB_ PDB info PDB header:oxidoreductase Chain: B: PDB Molecule:light-independent protochlorophyllide reductase subunit b; PDBTitle: structure of the light-independent protochlorophyllide reductase2 catalyzing a key reduction for greening in the dark Resolution 2.80 Å

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		174	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		N	R	E	R	R	A	L	A	N	F	Y	H	L	G	Q	L	N	P	P	A	L	S	G	S	D	I	L	K	V	V	Y	G	A	T	F	R	F	D	K	E	A	L	I	N	E	L	D	A	M	T	A	R	V	R	Q	Q	W	E	E	G	Q	R	L	D	P	R	P	R	I	L	I	T	G	C	P	I	G	G	A	A
Query Conservation
Alig confidence																																																														.	.												.	.
Template Conservation																																																														.	.												.	.
Template Sequence		E	S	A	A	R	H	L	E	R	A	C	K	Q	P	F	T	K	I	V	P	I	G	V	G	A	T	R	D	F	L	A	E	V	S	K	I	T	G	L	P	V	V	T	D	E	S	T	L	R	Q	P	W	W	S	A	S	V	D	S	T	.	.	Y	L	T	G	K	R	V	F	I	F	G	.	.	D	G	T	H	V
Template Known Secondary structure																B							S																								T	T									S	G	G	G	G	.	.	G	G	T	T							S	.	.	S
Template Predicted Secondary structure																																																														.	.												.	.
Template SS confidence
		217	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.			.	.	.	280	.	.	.	.	.	.	.			.	.	290	.	.
		254	.	.	.	.	.	260		.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.
Predicted Secondary structure									.
Query SS confidence									.
Query Sequence		E	K	V	V	R	A	I	.	E	E	N	G	G	W	V	V	G	Y	E	N	C	T	G	A	K	A	T	E	Q	C	V	A	E	T	G	D	V	Y	D	A	L	A	D	K	Y	L	A	I	G	C	S	C	V	S	P	N	D	Q	R	L	K	M	L	S	Q	M	V	E	E	Y	Q	V	D	G	V	V	D	V	I	L
Query Conservation									.
Alig confidence									.													.	.	.	.	.	.	.	.	.	.	.	.																										.	.
Template Conservation																						.	.	.	.	.	.	.	.	.	.	.	.																										.	.
Template Sequence		I	A	A	A	R	I	A	A	K	E	V	G	F	E	V	V	G	M	G	C	.	.	.	.	.	.	.	.	.	.	.	.	Y	N	R	E	M	A	R	P	L	R	T	A	A	A	E	Y	G	L	E	A	L	I	T	D	D	.	.	Y	L	E	V	E	K	A	I	E	A	A	A	P	E	L	I	L	G	T	Q	M
Template Known Secondary structure											T	T										.	.	.	.	.	.	.	.	.	.	.	.	S		G	G	G										T	T	T							S		.	.														S
Template Predicted Secondary structure																						.	.	.	.	.	.	.	.	.	.	.	.																										.	.
Template SS confidence
		293	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.													.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.			.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.
		333	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360
Predicted Secondary structure
Query SS confidence
Query Sequence		Q	A	C	H	T	Y	A	V	E	S	L	A	I	K	R	H	V	R	Q	Q	H	N	I	P	Y	I	A	I
Query Conservation
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	E	R	N	I	A	K	K	L	G	L	P	C	A	V	I
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.								T	T
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
															359	360	.	.	.	.	.	.	.	.	.	370	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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