 |
| Job Description | P39384 | | Confidence | 29.72% | Date | Thu Jan 5 12:00:17 GMT 2012 |
| Rank | 84 | Aligned Residues | 79 |
| % Identity | 6% | Template | c2xdqB_ |
| PDB info |
PDB header:oxidoreductase | Chain: B: PDB Molecule:light-independent protochlorophyllide reductase subunit b; |
PDBTitle: dark operative protochlorophyllide oxidoreductase (chln-2 chlb)2 complex
|
| Resolution | 2.40 Å |
|
| | |
305 | . | . | . | . | 310 | . | . | . | . | . | . | . | . | . | 320 | . | . | . | . | . | . | . | . | . | 330 | . | . | . | . | . | . | . | . | . | 340 | . | . | . | . | . | . | . | . | . | 350 | . | . | . | . | . | . | . | . | . | 360 | . | . | . | |
. | . | . | . | . | . | 370 | . | . | . | . | . | . | . | . | . | 380 | . | . | . |
| Predicted Secondary structure | |
|
|
|  | | | | | | | | | | | | | | |
|
|
|  | | | |  |
|
|
|
|
|
|
|
|
|
| | | | | | | | | | | | |
|
|
|
| | | | | |
|
| . |
|
|
|
|
| | | | | | | | | | | | | |
|
|
| Query SS confidence | |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| Query Sequence | |
V | S | P | N | D | Q | R | L | K | M | L | S | Q | M | V | E | E | Y | Q | V | D | G | V | V | D | V | I | L | Q | A | C | H | T | Y | A | V | E | S | L | A | I | K | R | H | V | R | Q | Q | H | N | I | P | Y | I | A | I | E | T | D | . |
Y | S | T | S | D | V | G | Q | L | S | T | R | V | A | A | F | I | E | M | L |
| Query Conservation | |
| | | | | |
| | | |
| | | |
| | | | | |
|
|
|
| | | | | | |
| | | | | | | | | |
| | | |
| |
| | |
|
|
| |
| |
|
| |
| . | | | | | | |
|
| | |
|
|
|
|
|
| |
| |
|
| Alig confidence | |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| Template Conservation | |
|
| | | |
|
| | |
|
| | | | | | | | |
| | |
| |
| |
|
|
| | | |
|
|
|
|
|
| | |
| | | | | | | | | | |
|
|
| |
| | | |
|
| |
| | | | |
| | | |
|
| | |
| | | | |
| Template Sequence | |
R | G | S | Q | E | K | V | V | D | N | I | I | R | K | D | T | E | E | H | P | D | L | I | V | L | T | P | T | C | T | S | S | I | L | Q | E | D | L | Q | N | F | V | R | R | A | S | L | S | T | T | A | D | V | L | L | A | D | V | N | H | Y | R | V | N | E | L | Q | A | A | D | R | T | L | E | Q | I | V | Q | F | Y |
| Template Known Secondary structure | |
T |
| S | S | S | | | | | | | | | | | | | |
|
| S | | | | | |
|
| | | | | T | T |
|
|
| | | | | | | | | | | |
| S | S | | | | |
|
|
|
| T | T | T |
|
| | | | | | | | | | | | | | | | |
| Template Predicted Secondary structure | |
|
|
| | | | | | | | | | | | | | |
|
|
|
| | | | | |
|
|
|
| | | | | |
|
| | | | | | | | | | | |
|
|
|
| | | | | |
|
|
|
|
|
|
|
| | | | | | | | | | | | | | | |
| Template SS confidence | |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| | |
67 | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | . | . | . |
| |
No model constructed - rank, confidence too low
Phyre is for academic use only
| Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
| Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
| |
|
|
|
