Job Description P39384 Confidence 51.01% Date Thu Jan 5 12:00:17 GMT 2012 Rank 43 Aligned Residues 139 % Identity 14% Template c2r7aC_ PDB info PDB header:transport protein Chain: C: PDB Molecule:bacterial heme binding protein; PDBTitle: crystal structure of a periplasmic heme binding protein2 from shigella dysenteriae Resolution 2.05 Å

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		33	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.			.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110
Predicted Secondary structure																									.	.
Query SS confidence																									.	.
Query Sequence		I	P	L	V	G	T	Y	C	T	F	M	P	Q	E	I	P	M	A	A	G	A	V	V	.	.	V	S	L	C	S	T	S	D	E	T	I	E	E	A	E	K	D	L	P	R	N	L	C	P	L	I	K	S	S	Y	G	F	G	K	T	D	K	C	P	Y	F	Y	F	S	D	L	V	V	G	E	T	T	C	D	G
Query Conservation																									.	.
Alig confidence												.	.												.	.																.	.	.																				.	.	.	.	.	.
Template Conservation												.	.																													.	.	.																				.	.	.	.	.	.
Template Sequence		E	R	I	V	V	A	G	G	S	L	.	.	T	E	L	I	Y	A	M	G	A	G	E	R	V	V	G	V	D	E	T	T	S	Y	P	P	E	T	A	K	.	.	.	L	P	H	I	G	Y	W	K	Q	L	S	S	E	G	I	L	S	L	R	.	.	.	.	.	.	P	D	S	V	I	T	W	Q	D	A	G	P
Template Known Secondary structure								S				.	.							T	T		G	G	G						T	T				S	G	G	G	T	T	.	.	.	S		B		S	B	T	T	B								T	T		.	.	.	.	.	.		S						T	T		S
Template Predicted Secondary structure												.	.																													.	.	.																				.	.	.	.	.	.
Template SS confidence
		24	.	.	.	.	.	30	.	.	.			.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.				.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80							.	.	.	.	.	.	.	.	.	90	.	.
		111	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190
Predicted Secondary structure
Query SS confidence
Query Sequence		K	K	K	M	Y	E	Y	M	A	E	F	K	P	V	H	V	M	Q	L	P	N	S	V	K	D	D	A	S	R	A	L	W	K	A	E	M	L	R	L	Q	K	T	V	E	E	R	F	G	H	E	I	S	E	D	A	L	R	D	A	I	A	L	K	N	R	E	R	R	A	L	A	N	F	Y	H	L	G	Q	L	N
Query Conservation
Alig confidence																									.	.	.	.	.	.	.	.	.																			.	.	.
Template Conservation																									.	.	.	.	.	.	.	.	.																			.	.	.
Template Sequence		Q	I	V	L	D	Q	L	R	A	Q	K	V	N	V	V	T	L	P	R	V	P	A	T	.	.	.	.	.	.	.	.	.	L	E	Q	M	Y	A	N	I	R	Q	L	A	K	T	L	Q	V	P	.	.	.	E	Q	G	D	A	L	V	T	Q	I	N	Q	R	L	E	R	V	Q	Q	N	V	A	A	K	K	A	P
Template Known Secondary structure											T	T										S			.	.	.	.	.	.	.	.	.															T	T			.	.	.																								S	S	S
Template Predicted Secondary structure																									.	.	.	.	.	.	.	.	.																			.	.	.
Template SS confidence
		93	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.										.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.				.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160
		191	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		P	P	A	L
Query Conservation
Alig confidence
Template Conservation
Template Sequence		V	K	A	M
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		161	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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