Job Description P39384 Confidence 86.14% Date Thu Jan 5 12:00:17 GMT 2012 Rank 10 Aligned Residues 100 % Identity 17% Template c2pn1A_ PDB info PDB header:ligase Chain: A: PDB Molecule:carbamoylphosphate synthase large subunit; PDBTitle: crystal structure of carbamoylphosphate synthase large subunit (split2 gene in mj) (zp_00538348.1) from exiguobacterium sp. 255-15 at 2.00 a3 resolution Resolution 2.00 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		236	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.			.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.
Predicted Secondary structure																															.	.
Query SS confidence																															.	.
Query Sequence		L	D	P	R	P	R	I	L	I	T	G	C	P	I	G	G	A	A	E	K	V	V	R	A	I	E	E	N	G	.	.	G	W	V	V	G	Y	E	N	C	T	G	A	K	A	T	E	Q	C	V	A	E	T	G	D	V	Y	D	A	L	A	D	K	Y	L	A	I	G	C	S	C	V	S	P	N	D	Q	R	L	K
Query Conservation																															.	.
Alig confidence													.	.	.																.	.									.	.	.	.	.	.	.	.	.	.	.	.																				.	.	.
Template Conservation													.	.	.																										.	.	.	.	.	.	.	.	.	.	.	.																				.	.	.
Template Sequence		G	X	Q	K	P	H	L	L	I	T	S	.	.	.	A	G	R	R	A	K	L	V	E	Y	F	V	K	E	F	K	T	G	R	V	S	T	A	D	C	.	.	.	.	.	.	.	.	.	.	.	.	S	P	L	A	S	A	L	Y	X	A	D	Q	H	Y	I	V	P	K	I	.	.	.	D	E	V	E	Y	I	D
Template Known Secondary structure			T	T								S	.	.	.		T	T														S	S							S	.	.	.	.	.	.	.	.	.	.	.	.		T	T		G	G	G	G	G	S	S	S							T	.	.	.	T	S	T	T
Template Predicted Secondary structure													.	.	.																										.	.	.	.	.	.	.	.	.	.	.	.																				.	.	.
Template SS confidence
		0	.	.	.	.	.	.	.	.	.	10				.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.													.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.				.	.	.	.	.	60	.
		314	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		M	L	S	Q	M	V	E	E	Y	Q	V	D	G	V	V	D	V	I	L	Q	A	C	H	T	Y	A	V	E	S	L	A	I	K	R	H	V	R	Q	Q	H	N	I	P	Y	I
Query Conservation
Alig confidence																		.	.	.	.																	.
Template Conservation																		.	.	.	.																	.
Template Sequence		H	L	L	T	L	C	Q	D	E	G	V	T	A	L	L	T	.	.	.	.	L	I	D	P	E	L	G	L	L	A	Q	A	T	E	R	F	.	Q	A	I	G	V	T	V	I
Template Known Secondary structure											T							.	.	.	.	S	S										T					.		T	T	T
Template Predicted Secondary structure																		.	.	.	.																	.
Template SS confidence
		62	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.					.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.		.	.	.	.	.	.	100	.

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions