Job Description P39384 Confidence 31.31% Date Thu Jan 5 12:00:17 GMT 2012 Rank 77 Aligned Residues 129 % Identity 13% Template c2ov3A_ PDB info PDB header:transport protein Chain: A: PDB Molecule:periplasmic binding protein component of an abc PDBTitle: crystal structure of 138-173 znua deletion mutant plus zinc2 bound Resolution 2.40 Å

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		205	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	A	T	F	R	F	D	K	E	A	L	I	N	E	L	D	A	M	T	A	R	V	R	Q	Q	W	E	E	G	Q	R	L	D	P	R	P	R	I	L	I	T	G	C	P	I	G	G	A	A	E	K	V	V	R	A	I	E	E	N	G	G	W	V	V	G	Y	E	N	C	T	G	A	K	A	T	E	Q	C	V	A
Query Conservation
Alig confidence																																	.	.	.	.	.													.	.	.	.	.	.												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																	.	.	.	.	.													.	.	.	.	.	.												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		R	D	Q	Y	E	A	N	L	A	A	F	L	A	E	L	E	R	L	N	Q	E	L	G	Q	I	L	Q	P	L	P	Q	.	.	.	.	.	R	K	F	I	V	F	H	P	S	W	A	Y	.	.	.	.	.	.	F	A	R	D	Y	N	L	V	Q	I	P	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure																												T	T		S		.	.	.	.	.						S	S						.	.	.	.	.	.					T	T						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																	.	.	.	.	.													.	.	.	.	.	.												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		206	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.						.	.	.	240	.	.	.	.	.	.	.	.							.	250	.	.	.	.	.	.	.	.	.
		285	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	T	G	D	V	Y	D	A	L	A	D	K	Y	L	A	I	G	C	S	C	V	S	P	N	D	Q	R	L	K	M	L	S	Q	M	V	E	E	Y	Q	V	D	G	V	V	D	V	I	L	Q	A	C	H	T	Y	A	V	E	S	L	A	I	K	R	H	V	R	Q	Q	H	N	I	P	Y	I	A	I	E	T	D	Y
Query Conservation
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																			.	.	.	.	.	.	.	.
Template Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																			.	.	.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	I	E	V	E	G	Q	E	P	S	A	Q	E	L	K	Q	L	I	D	T	A	K	E	N	N	L	T	M	V	F	G	E	T	Q	F	.	.	.	.	.	.	.	.	S	T	K	S	S	E	A	I	A	A	E	I	G	A	G	V	E	L	L	D	P	L	A
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S			S	S	S				T	T													T								T	T	S	.	.	.	.	.	.	.	.													T								T	T
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																			.	.	.	.	.	.	.	.
Template SS confidence
																	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.									.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.
		365	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	T	S	D	V	G	Q	L	S	T	R	V	A	A	F	I	E	M	L
Query Conservation
Alig confidence					.
Template Conservation					.
Template Sequence		A	D	W	.	S	S	N	L	K	A	V	A	Q	K	I	A	N	A	N
Template Known Secondary structure		S	S		.
Template Predicted Secondary structure					.
Template SS confidence
		317	.	.		320	.	.	.	.	.	.	.	.	.	330	.	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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