 |
Job Description | P39384 | Confidence | 25.37% | Date | Thu Jan 5 12:00:17 GMT 2012 |
Rank | 103 | Aligned Residues | 51 |
% Identity | 8% | Template | c2nytB_ |
PDB info |
PDB header:hydrolase | Chain: B: PDB Molecule:probable c->u-editing enzyme apobec-2; |
PDBTitle: the apobec2 crystal structure and functional implications2 for aid
|
Resolution | 2.50 Å |
|
  |   |
243 | . | . | . | . | . | . | 250 | . | . | . | . | . | . | . | . | . | 260 | . | . | . | . | . | . | . | . | . | 270 | . | . | . | . | . | . | . | . | . | 280 | . | . | . | . | . | . | . | . | . | 290 | . | . | . | . | . | . |
Predicted Secondary structure |   |
 |  |  |  |
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
L | I | T | G | C | P | I | G | G | A | A | E | K | V | V | R | A | I | E | E | N | G | G | W | V | V | G | Y | E | N | C | T | G | A | K | A | T | E | Q | C | V | A | E | T | G | D | V | Y | D | A | L | A | D | K |
Query Conservation |   |
  |
|   |
|   |   |   |   |   |   |   |   |   |
|   |   |   |
|
|   |   |
|   |   |
|
|   |   |
|   |
|   |
|   |
|   |   |   |   |   |   |   |   |   |   |
|
|   |   |   |
|
|   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|   |
|
|
|
|
|   |   |
|
|   |   |
|
|   |
|
|   |   |   |   |   |
|   |
|   | . | . | . |
|
|   |
|
|
|
|   |   |   |   |   |   |   |
|   |
|
|
|   |
|   |   |
|
Template Sequence |   |
Y | V | S | S | S | P | C | A | A | C | A | D | R | I | I | K | T | L | S | K | T | K | N | L | R | L | L | . |
. |
. |
I | L | V | G | R | L | F | M | W | E | E | P | E | I | Q | A | A | L | K | K | L | K | E | A |
Template Known Secondary structure |   |
 |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
| T | T |  |  |  |  | . | . | . |  |  |  |  |  |
| T | T | T | T |
|  |  |  |  |  |  |  |  |  |  |  |  | T |
Template Predicted Secondary structure |   |
 |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  | . | . | . |  |  |  |  |  |  |  |  |  |  |
|  |  |  |  |  |  |  |  |  |  |  |  |
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
122 | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | . | . | . | . | . | |
|
|
. | 150 | . | . | . | . | . | . | . | . | . | 160 | . | . | . | . | . | . | . | . | . | 170 | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|