Return to main results Retrieve Phyre Job Id

Job DescriptionP39384
Confidence76.09%DateThu Jan 5 12:00:17 GMT 2012
Rank16Aligned Residues101
% Identity18%Templatec2dzdB_
PDB info PDB header:ligaseChain: B: PDB Molecule:pyruvate carboxylase; PDBTitle: crystal structure of the biotin carboxylase domain of2 pyruvate carboxylase
Resolution2.40 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   240.........250.........260.........270.........280.........290.........300.........310. .......
Predicted Secondary structure 





































.
Query SS confidence 







































































.






Query Sequence  PRILITGCPIGGAAEKVVRAIEENGGWVVGYENCTGAKATEQCVAETGDVYDALADKYLAIGCSCVSPNDQR. LKMLSQM
Query Conservation   

 
 
         
   

  
  

  
 
 
 
          

   

  

            
.   
   
Alig confidence 






..























..........




























.






Template Conservation   



  .. 
  
  




   
  

 
  ..........  
  
     

                
   
   
Template Sequence  RKVLVAN. . RGEIAIRVFRACTELGIRTVAIYS. . . . . . . . . . KEDVGSYHRYKADEAYLVGEGKKPIEAYLDIEGIIEI
Template Known Secondary structure  S

..
TT

..........GGGGG
GGGGGSS
STTS
TT
Template Predicted Secondary structure 
..





..........

















Template SS confidence 















































































   7..10... ......20.........30....... ..40.........50.........60.........70....
 
   319320.........330.........340.........350........
Predicted Secondary structure 
















Query SS confidence 







































Query Sequence  VEEYQVDGVVDVILQACHTYAVESLAIKRHVRQQHNIPYI
Query Conservation 
     



      
         
   
 
  


 
Alig confidence 










.....














.







Template Conservation        
 


.....              
.   

   
Template Sequence  AKAHDVDAIHP. . . . . GYGFLSENIQFAKRC. REEGIIFI
Template Known Secondary structure  TT


.....
SSSSTT
.TT
S
Template Predicted Secondary structure 



.....







.


Template SS confidence 







































   75....80..... ....90.........100 ........
 
Download:Text version FASTA pairwise alignment 3D Model in PDB format

View in Jmol

Send structure to FirstGlance for more viewing options


Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions