Job Description P39384 Confidence 72.99% Date Thu Jan 5 12:00:17 GMT 2012 Rank 19 Aligned Residues 184 % Identity 19% Template c1m6vE_ PDB info PDB header:ligase Chain: E: PDB Molecule:carbamoyl phosphate synthetase large chain; PDBTitle: crystal structure of the g359f (small subunit) point mutant of2 carbamoyl phosphate synthetase Resolution 2.10 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.		.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.
Predicted Secondary structure																																							.
Query SS confidence																																							.
Query Sequence		Q	K	T	V	E	E	R	F	G	H	E	I	S	E	D	A	L	R	D	A	I	A	L	K	N	R	E	R	R	A	L	A	N	F	Y	H	L	.	G	Q	L	N	P	P	A	L	S	G	S	D	I	L	K	V	V	Y	G	A	T	F	R	F	D	K	E	A	L	I	N	E	L	D	A	M	T	A	R	V	R	Q
Query Conservation																																							.
Alig confidence																																							.
Template Conservation
Template Sequence		I	W	Y	I	A	D	A	F	R	A	G	L	S	V	D	G	V	F	N	L	T	N	I	D	R	W	F	L	V	Q	I	E	E	L	V	R	L	E	E	K	V	A	E	V	G	I	T	G	L	N	A	D	F	L	R	Q	L	K	R	K	G	F	A	D	A	R	L	A	K	L	A	G	V	R	E	A	E	I	R	K
Template Known Secondary structure											T	T																																		T	G	G	G												T	T											T	S
Template Predicted Secondary structure
Template SS confidence
		436	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.
		229	230	.																																		.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250										.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.
Predicted Secondary structure					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																				.	.	.	.	.	.	.	.	.
Query SS confidence					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																				.	.	.	.	.	.	.	.	.
Query Sequence		Q	W	E	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	E	G	Q	R	L	D	P	R	P	R	I	L	I	T	G	C	P	I	G	.	.	.	.	.	.	.	.	.	G	A	A	E	K	V	V	R	A	I	E	E	N	G	G	W
Query Conservation					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																				.	.	.	.	.	.	.	.	.
Alig confidence					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																				.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		L	R	D	Q	Y	D	L	H	P	V	Y	K	R	V	D	T	C	A	A	E	F	A	T	D	T	A	Y	M	Y	S	T	Y	E	E	E	C	E	A	N	P	S	T	D	R	E	K	I	M	V	L	G	G	G	P	N	R	I	G	Q	G	I	E	F	D	Y	C	C	V	H	A	S	L	A	L	R	E	D	G	Y	E
Template Known Secondary structure						T	T										S	B	T	T	S	S											S	S	S								S	S	S										S		B	T	T	B																		T	T
Template Predicted Secondary structure
Template SS confidence
		516	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.
		267	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	V	G	Y	E	N	C	T	G	A	K	A	T	E	Q	C	V	A	E	T	G	D	V	Y	D	A	L	A	D	K	Y	L	A	I	G	C	S	C	V	S	P	N	D	Q	R	L	K	M	L	S	Q	M	V	E	E	Y	Q	V	D	G	V	V	D	V	I	L	Q	A	C	H	T	Y	A	V	E	S	L	A	I	K
Query Conservation
Alig confidence								.	.	.	.	.	.	.	.	.	.																						.	.	.	.	.	.	.	.																					.	.	.	.	.	.
Template Conservation								.	.	.	.	.	.	.	.	.	.																						.	.	.	.	.	.	.	.																					.	.	.	.	.	.
Template Sequence		T	I	M	V	N	C	.	.	.	.	.	.	.	.	.	.	N	P	E	T	V	S	T	D	Y	D	T	S	D	R	L	Y	F	E	P	V	T	.	.	.	.	.	.	.	.	L	E	D	V	L	E	I	V	R	I	E	K	P	K	G	V	I	V	Q	Y	.	.	.	.	.	.	G	G	Q	T	P	L	K	L	A
Template Known Secondary structure								.	.	.	.	.	.	.	.	.	.		T	T	S	G	G	G	S	G	G	G	S	S								S	.	.	.	.	.	.	.	.														S					S	S	.	.	.	.	.	.	S						T	T
Template Predicted Secondary structure								.	.	.	.	.	.	.	.	.	.																						.	.	.	.	.	.	.	.																					.	.	.	.	.	.
Template SS confidence
		596	.	.	.	600	.											.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.									.	.	.	.	.	.	.	630	.	.	.	.	.	.	.	.	.	640	.	.							.	.	.	.	.	.	.	650	.
		347	.	.	350	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	H	V	R	Q	Q	H	N	I	P	Y	I
Query Conservation
Alig confidence					.
Template Conservation					.
Template Sequence		R	A	L	.	E	A	A	G	V	P	V	I
Template Known Secondary structure					.			T	T			B
Template Predicted Secondary structure					.
Template SS confidence
		652	.	.		.	.	.	.	.	660	.	.

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions