 |
Job Description | P0AFU2 | Confidence | 3.32% | Date | Thu Jan 5 11:27:16 GMT 2012 |
Rank | 18 | Aligned Residues | 63 |
% Identity | 13% | Template | d1sdwa2 |
SCOP info | Nucleoplasmin-like/VP (viral coat and capsid proteins)
| PHM/PNGase F
| Peptidylglycine alpha-hydroxylating monooxygenase, PHM
|
Resolution | 1.85 |
|
 |
  |   |
329 | 330 | . | . | . | . | . | . | . | . | . | 340 | . | . | . | . | . | . | . | . | . | 350 | . | . | . | . | . | . | . | . | . | 360 | . | . | . | . | . | . | . | . | . | 370 | . | |
. | . | . | . | . | . | . | . | 380 | . | . | . | . | . | . | . | . | . | 390 | . |
Predicted Secondary structure |   |
 |  |  |
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |
|
|  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
| . |
|  |  |  |
|
|  |  |  |  |  |  |  |
|  |  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
I | S | L | I | P | E | S | E | L | I | G | K | S | V | R | E | I | G | F | R | T | R | Y | G | L | N | V | V | G | L | K | R | N | G | V | A | L | E | G | S | L | A | D | . |
E | P | L | L | L | G | D | I | I | L | V | V | G | N | W | K | L | I | G | M |
Query Conservation |   |
  |
|
|   |   |   |
|   |
|
|
|
|
|
|   |   |   |   |   |
|   |   |   |   |
|   |
|
|   |
|   |
|   |   |   |   |   |   |   |   |
|   |   | . |   |   |
|   |   |
|
|   |
|
|
|   |
|   |   |   |   |   |   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|
|   |   |   |
|
|
|   |   |
|
|   |
|   |   |   |   |
|
|   |
|   |   |   |   |
|   |   |   |
|   |   |   |   |
|   |
|
|   |
|   |   |   |
|   |
|   |
|
|
|   |
|   |   |   |
|   |
|
|
|   |   |
|
Template Sequence |   |
F | A | Y | R | V | H | T | H | H | L | G | K | V | V | S | G | Y | R | V | R | N | G | Q | W | T | L | I | G | R | Q | N | P | Q | L | P | Q | A | F | Y | P | V | E | H | P | V | D | V | T | F | G | D | I | L | A | A | R | C | V | F | T | G | E | G | R |
Template Known Secondary structure |   |
 |  |  |  |  |  |
|
| T | T |  |  |  |  |  |  |  |  |  |  | T | T |  |  |  |  |  |  |  |  |
| T | T | S |
|
|
|
|  |  |  |  |  |  |  |  |  |
| T | T |
|  |  |  |  |  |  |  |  |
|
| T | T |
|
Template Predicted Secondary structure |   |
 |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |
|
|  |  |  |  |
|
|
|
|
|
|
|
|
|
|  |  |  |  |
|
|
|
|  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |
|
|
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
237 | . | . | 240 | . | . | . | . | . | . | . | . | . | 250 | . | . | . | . | . | . | . | . | . | 260 | . | . | . | . | . | . | . | . | . | 270 | . | . | . | . | . | . | . | . | . | 280 | . | . | . | . | . | . | . | . | . | 290 | . | . | . | . | . | . | . | . | . | 300 |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|