Job Description P0AFU2 Confidence 98.78% Date Thu Jan 5 11:27:16 GMT 2012 Rank 6 Aligned Residues 71 % Identity 17% Template c3jxoB_ PDB info PDB header:transport protein Chain: B: PDB Molecule:trka-n domain protein; PDBTitle: crystal structure of an octomeric two-subunit trka k+ channel ring2 gating assembly, tm1088a:tm1088b, from thermotoga maritima Resolution 1.55 Å

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		321	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	L	D	V	G	M	A	E	I	S	L	I	P	E	S	E	L	I	G	K	S	V	R	E	I	G	F	R	T	R	Y	G	L	N	V	V	G	L	K	R	N	G	V	A	L	E	G	S	L	A	D	E	P	L	L	L	G	D	I	I	L	V	V	G	N	W	K	L	I	G	M	L	A	K
Query Conservation
Alig confidence																															.	.																.
Template Conservation																															.	.																.
Template Sequence		E	Q	G	I	E	F	L	S	V	N	V	E	E	D	S	P	V	V	G	K	K	L	K	D	L	P	L	P	R	.	.	D	S	I	I	A	A	I	V	R	G	G	V	L	V	V	.	P	R	G	D	T	E	I	L	S	G	D	K	L	Y	V	I	V	S	A	E	A	K	E	T	V	E	E
Template Known Secondary structure			T	T										T	T		T	T	T	T		B	G	G	G					T	.	.	T									T	T					.			T	T		B			T	T									T	T	T
Template Predicted Secondary structure																															.	.																.
Template SS confidence
		143	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.			.	.	.	.	.	.	.	.	180	.	.	.	.	.	.		.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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