Phyre 2 alignment of P0AFU2 with c2jreA

Job Description P0AFU2
Confidence 1.67% Date Thu Jan 5 11:27:16 GMT 2012

Rank 67 Aligned Residues 67

% Identity 21% Template c2jreA_

PDB info PDB header:de novo protein Chain: A: PDB Molecule:c60-1 pdz domain peptide; PDBTitle: c60-1, a pdz domain designed using statistical coupling2 analysis

Resolution UNK

	Insertion relative to template
	Deletion relative to template
	Catalytic residue from the CSA

Detailed help on interpreting your alignment

	313	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.					.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.
Predicted Secondary structure																																.	.	.	.
Query SS confidence																																.	.	.	.
Query Sequence	R	G	E	Y	F	S	D	Q	A	L	D	V	G	M	A	E	I	S	L	I	P	E	S	E	L	I	G	K	S	V	R	.	.	.	.	E	I	G	F	R	T	R	Y	G	L	N	V	V	G	L	K	R	N	G	V	A	L	E	G	S	L	A	D	E	P	L	L	L	G	D	I	I	L	V	V
Query Conservation																																.	.	.	.
Alig confidence																																.	.	.	.																						.	.	.	.
Template Conservation																																																									.	.	.	.
Template Sequence	S	H	G	Y	S	D	A	S	G	F	S	L	Y	S	V	E	L	F	R	E	K	D	T	S	S	L	G	I	S	I	S	G	M	R	D	Q	S	T	T	G	E	A	T	G	I	Y	V	K	S	L	I	P	G	S	A	A	.	.	.	.	A	L	D	G	R	I	E	P	N	D	K	I	L	R	V
Template Known Secondary structure						S	S	S	S												S	T	T	S			S										S		S	S												T	T	S			.	.	.	.				S	S			S	S
Template Predicted Secondary structure																																																									.	.	.	.
Template SS confidence
	2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.					.	.	60	.	.	.	.	.	.	.	.	.	70	.	.

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Text version

No model constructed - rank, confidence too low

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server

Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]

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Lawrence Kelley, Benjamin Jefferys
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