Return to main results Retrieve Phyre Job Id

Job DescriptionP15070
Confidence6.18%DateThu Jan 5 11:34:34 GMT 2012
Rank76Aligned Residues37
% Identity22%Templatec3cw1Z_
PDB info PDB header:splicingChain: Z: PDB Molecule:small nuclear ribonucleoprotein f; PDBTitle: crystal structure of human spliceosomal u1 snrnp
Resolution5.49 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   8990.........100.........110.........120.....
Predicted Secondary structure 












Query SS confidence 




































Query Sequence  LDGLAGEPLDILINGYLIAQGEVVVVADKYGVRITDI
Query Conservation 
       
 
 


  

 



 
    




 
Alig confidence 




































Template Conservation 
       
 
 
  
    
 
   
  




   
Template Sequence  LNGLTGKPVMVKLKWGMEYKGYLVSVDGYMNMQLANT
Template Known Secondary structure  SS
TTS

TT

Template Predicted Secondary structure 











Template SS confidence 




































   211........220.........230.........240.......
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions