Return to main results Retrieve Phyre Job Id

Job DescriptionP0AFM4
Confidence0.82%DateThu Jan 5 11:26:45 GMT 2012
Rank92Aligned Residues15
% Identity13%Templatec2v8sV_
PDB info PDB header:protein transportChain: V: PDB Molecule:vesicle transport through interaction with PDBTitle: vti1b habc domain - epsinr enth domain complex
Resolution2.22 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   43......50.......
Predicted Secondary structure 



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Query Sequence  QALKGDARKTYMSDC
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Template Conservation      

 

  
  
Template Sequence  GTAGTEEKKKLVRDF
Template Known Secondary structure  S


S
Template Predicted Secondary structure 




Template SS confidence 














   34.....40........
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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