 |
| Job Description | P0AFM4 | | Confidence | 3.68% | Date | Thu Jan 5 11:26:45 GMT 2012 |
| Rank | 5 | Aligned Residues | 7 |
| % Identity | 43% | Template | c1ce4A_ |
| PDB info |
PDB header:viral protein | Chain: A: PDB Molecule:protein (v3 loop of hiv-1 envelope protein); |
PDBTitle: conformational model for the consensus v3 loop of the2 envelope protein gp120 of hiv-1
|
| Resolution | UNK |
|
| | |
47 | . | . | 50 | . | . | . |
| Predicted Secondary structure | |
 | | | | | | |
| Query SS confidence | |
|
|
|
|
|
|
|
| Query Sequence | |
G | D | A | R | K | T | Y |
| Query Conservation | |
|
|
|
|
|
|
|
| Alig confidence | |
|
|
|
|
|
|
|
| Template Conservation | |
|
|
|
|
|
| |
| Template Sequence | |
G | D | I | R | Q | A | H |
| Template Known Secondary structure | |
| | | | | T |
|
| Template Predicted Secondary structure | |
|
|
|
|  |  |
|
| Template SS confidence | |
|
|
|
|
|
|
|
| | |
28 | . | 30 | . | . | . | . |
| |
No model constructed - rank, confidence too low
Phyre is for academic use only
| Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
| Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
| |
|
|
|
