Job Description P33363 Confidence 100.00% Date Thu Jan 5 11:52:06 GMT 2012 Rank 7 Aligned Residues 476 % Identity 20% Template c3sqlB_ PDB info PDB header:hydrolase Chain: B: PDB Molecule:glycosyl hydrolase family 3; PDBTitle: crystal structure of glycoside hydrolase from synechococcus Resolution 2.25 Å

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		42	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.													.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																						.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																						.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		L	K	K	M	T	V	D	E	K	I	G	Q	L	R	L	I	S	V	G	P	.	.	.	.	.	.	.	.	.	.	.	.	D	N	P	K	E	A	I	R	E	M	I	K	D	G	Q	V	G	A	I	F	N	T	V	T	R	Q	D	I	R	A	M	Q	D	Q	V	M	E	L	S	R	L	K	I	P	L	F	F	A
Query Conservation																						.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																						.	.	.	.	.	.	.	.	.	.	.	.																																								.	.
Template Conservation																																																																									.	.
Template Sequence		V	E	S	L	S	L	R	Q	A	I	A	Q	X	I	V	V	R	G	A	G	Y	L	F	D	Y	E	R	P	Y	P	Q	W	E	A	D	Q	T	T	L	Q	R	W	I	E	A	G	I	G	G	V	I	L	L	G	G	S	A	A	E	V	A	Q	K	T	K	Q	L	Q	S	W	A	.	.	E	I	P	L	L	I	A
Template Known Secondary structure		G	G	G	S									T							S	S	S	S	G	G	G		S		T	T	T	S												T	T									S															T		.	.	S	S
Template Predicted Secondary structure																																																																									.	.
Template SS confidence
		9	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.			80	.	.	.	.	.	.
		110	.	.	.	.	.	.							.	.	.	120	.	.	.	.	.	.	.	.	.	130							.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.		170	.	.	.	.	.	.
Predicted Secondary structure									.	.	.	.	.	.															.	.	.	.	.	.																																								.
Query SS confidence									.	.	.	.	.	.															.	.	.	.	.	.																																								.
Query Sequence		Y	D	V	L	H	G	Q	.	.	.	.	.	.	R	T	V	F	P	I	S	L	G	L	A	S	S	F	.	.	.	.	.	.	N	L	D	A	V	K	T	V	G	R	V	S	A	Y	E	A	A	D	D	G	L	N	M	T	W	A	P	M	V	D	V	S	R	D	P	R	W	G	R	.	A	S	E	G	F	G	E
Query Conservation									.	.	.	.	.	.															.	.	.	.	.	.																																								.
Alig confidence									.	.	.	.	.	.															.	.	.	.	.	.																																								.
Template Conservation
Template Sequence		A	D	I	E	E	G	V	G	Q	R	F	R	G	A	T	E	F	P	P	P	X	A	F	G	E	I	W	R	T	D	P	H	Q	A	I	A	L	A	E	T	X	G	A	T	T	A	Q	E	A	L	S	L	G	I	N	W	V	L	A	P	V	L	D	V	N	N	N	P	H	N	P	V	I	N	I	R	A	F	G	E
Template Known Secondary structure					T	T		G	G	G	T	S	T	T	S																																							T								B						S	T	T		S	S	S	G	G	G	S	S		S
Template Predicted Secondary structure
Template SS confidence
		87	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.
		177	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.			.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.
Predicted Secondary structure																																																					.	.
Query SS confidence																																																					.	.
Query Sequence		D	T	Y	L	T	S	T	M	G	K	T	M	V	E	A	M	Q	G	K	S	P	A	D	R	Y	S	V	M	T	S	V	K	H	F	A	A	Y	G	A	V	E	G	G	K	E	Y	N	T	V	D	M	.	.	S	P	Q	R	L	F	N	D	Y	M	P	P	Y	K	A	G	L	D	A	G	S	G	A	V	M	V	A
Query Conservation																																																					.	.
Alig confidence																					.	.	.	.	.	.																											.	.
Template Conservation																					.	.	.	.	.	.
Template Sequence		T	P	D	Q	V	S	A	L	G	T	A	F	I	R	G	A	Q	Q	Y	.	.	.	.	.	.	A	V	L	T	T	A	K	H	F	P	G	H	G	D	T	A	T	D	S	H	L	A	L	P	T	I	S	H	D	D	T	R	L	N	T	V	E	L	P	P	F	K	A	A	I	Q	G	G	V	D	A	V	X	N	A
Template Known Secondary structure		S																T	T	S	.	.	.	.	.	.	S		B							T				S		S			T	T	T	S			B											T	T	S									T	T		S
Template Predicted Secondary structure																					.	.	.	.	.	.
Template SS confidence
		167	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.							.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240
		255	.	.	.	.	260	.					.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.				.	.
Predicted Secondary structure									.	.	.	.																																																																	.	.	.
Query SS confidence									.	.	.	.																																																																	.	.	.
Query Sequence		L	N	S	L	N	G	T	.	.	.	.	P	A	T	S	D	S	W	L	L	K	D	V	L	R	D	Q	W	G	F	K	G	I	T	V	S	D	H	G	A	I	K	E	L	I	K	H	G	T	A	A	D	P	E	D	A	V	R	V	A	L	K	S	G	I	N	M	S	M	S	D	E	Y	Y	S	.	.	.	K	Y
Query Conservation									.	.	.	.																																																																	.	.	.
Alig confidence									.	.	.	.																																						.	.	.																									.	.	.
Template Conservation																																																		.	.	.
Template Sequence		H	L	X	I	P	A	W	D	Q	Q	Y	P	A	T	L	S	P	A	I	L	T	G	Q	L	R	H	K	L	G	F	K	G	L	I	V	T	D	A	L	V	X	G	G	I	T	Q	F	A	.	.	.	A	P	D	T	V	V	V	Q	A	I	A	A	G	A	D	I	L	L	X	P	P	D	V	D	G	A	I	I	A
Template Known Secondary structure				B		T	T	T		S	S	S		G	G	G													T				S							T	T	S					T	T	S	.	.	.													T		S	B			S		S
Template Predicted Secondary structure																																																		.	.	.
Template SS confidence
		241	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.				.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.
		328	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	P	G	L	I	K	S	G	K	V	T	M	A	E	L	D	D	A	A	R	H	V	L	N	V	K	Y	D	M	G	L	F	N	D	P	Y	S	H	L	G	P	K	E	S	D	P	V	D	T	N	A	E	S	R	L	H	R	K	E	A	R	E	V	A	R	E	S	L	V	L	L	K	N	R	L	E	T	L	P	L
Query Conservation
Alig confidence																																					.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																					.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		I	E	T	A	I	K	T	G	Q	L	S	E	S	R	I	Y	E	S	V	E	R	I	W	Q	A	K	Q	K	I	L	T	P	S	T	F	.	.	.	.	.	.	.	.	.	.	.	.	.	P	Q	G	I	S	G	D	R	P	E	T	R	K	T	V	A	X	V	L	E	R	A	T	K	H	Q	K	S	L	V	K	I
Template Known Secondary structure								T	T	S	S																									T	.	.	.	.	.	.	.	.	.	.	.	.	.	T	T	T			T	T																				S	S
Template Predicted Secondary structure																																					.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		318	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.														.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.
		408	.	410		.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.
Predicted Secondary structure					.
Query SS confidence					.
Query Sequence		K	K	S	.	A	T	I	A	V	V	G	P	L	A	D	S	K	R	D	V	M	G	S	W	S	A	A	G	V	A	D	Q	S	V	T	V	L	T	G	I	K	N	A	V	G	E	N	G	K	V	L	Y	A	K	G	A	N	V	T	S	D	K	G	I	I	D	F	L	N	Q	Y	E	E	A	V	K	V	D	P	R
Query Conservation					.
Alig confidence					.									.	.	.	.	.	.	.	.																																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation														.	.	.	.	.	.	.	.																																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		S	S	F	P	D	N	F	A	R	N	L	I	.	.	.	.	.	.	.	.	V	V	D	S	V	L	K	S	P	F	L	R	P	N	C	P	A	I	A	I	P	Q	R	H	G	Y	A	A	E	I	V	E	L	K	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure					S	T	T	S						.	.	.	.	.	.	.	.			S		G	G	G		T	T			T	T										T	T								T	T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure														.	.	.	.	.	.	.	.																																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		387	.	.	390	.	.	.	.	.	.	.	.									.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.
		487	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	P	Q	E	M	I	D	E	A	V	Q	T	A	K	Q	S	D	V	V	V	A	V	V	G	E	A	Q	G	M	A	H	E	A	S	S	R	T	D	I	T	I	P	Q	S	Q	R	D	L	I	A	A	L	K	A	T	G	K	P	L	V	L	V	L	M	N	G	R	P	L	A	L	V	K	E	D	Q	Q	A	D	A
Query Conservation
Alig confidence		.	.	.	.	.																										.	.	.	.	.	.	.	.	.	.																								.
Template Conservation		.	.	.	.	.																										.	.	.	.	.	.	.	.	.	.																								.
Template Sequence		.	.	.	.	.	T	L	P	R	L	Q	L	E	A	I	P	T	L	I	Q	C	F	L	R	G	N	P	F	T	E	.	.	.	.	.	.	.	.	.	.	K	L	A	D	P	I	D	V	L	Q	K	I	A	A	Q	I	P	L	Q	G	V	I	F	.	Y	G	S	P	Y	F	L	E	A	L	Q	T	T	L	P	E
Template Known Secondary structure		.	.	.	.	.	T	G	G	G					S	S												S	S		S	.	.	.	.	.	.	.	.	.	.	S															S								.					T	T									T	T
Template Predicted Secondary structure		.	.	.	.	.																										.	.	.	.	.	.	.	.	.	.																								.
Template SS confidence
							433	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.											.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480		.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.
		567	.	.	570	.	.	.	.	.			.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.
Predicted Secondary structure											.	.
Query SS confidence											.	.
Query Sequence		I	L	E	T	W	F	A	G	T	.	.	E	G	G	N	A	I	A	D	V	L	F	G	D	Y	N	P
Query Conservation											.	.
Alig confidence											.	.
Template Conservation
Template Sequence		I	P	W	W	F	S	Y	G	Q	X	A	I	A	Q	A	E	I	C	T	S	L	W	E	E	A	A	E
Template Known Secondary structure		S						S			S
Template Predicted Secondary structure
Template SS confidence
		497	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.