Job Description P33363 Confidence 69.74% Date Thu Jan 5 11:52:06 GMT 2012 Rank 63 Aligned Residues 87 % Identity 15% Template c3fcsA_ PDB info PDB header:cell adhesion/blood clotting Chain: A: PDB Molecule:integrin, alpha 2b; PDBTitle: structure of complete ectodomain of integrin aiibb3 Resolution 2.55 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		654	.	.	.	.	.	660	.	.	.	.	.							.	.	.	.	670	.	.	.	.	.	.	.	.	.	680	.	.	.	.	.	.	.	.	.	690	.	.	.	.	.	.	.	.	.	700	.	.	.	.	.	.	.	.	.	710	.	.
Predicted Secondary structure														.	.	.	.	.	.																																																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence														.	.	.	.	.	.																																																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		S	D	V	K	L	S	A	P	T	M	K	R	.	.	.	.	.	.	D	G	K	V	T	A	S	V	Q	V	T	N	T	G	K	R	E	G	A	T	V	V	Q	M	Y	L	Q	D	V	T	A	S	M	S	R	P	V	K	Q	L	K	G	F	E	K	I	T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Conservation														.	.	.	.	.	.																																																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence														.	.	.	.	.	.																.	.																															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																			.	.
Template Sequence		P	Q	L	Q	L	T	A	S	V	T	G	S	P	L	L	V	G	A	D	N	V	L	E	L	Q	M	D	A	A	N	E	G	E	.	.	G	A	Y	E	A	E	L	A	V	H	L	P	Q	G	A	H	Y	M	R	A	L	S	N	V	E	F	E	R	L	I	C	N	Q	K	K	E	N	E	T	R	V	V	L	C	E
Template Known Secondary structure												S		S			T	T	S														S	S	.	.		B	T	T									T	T											.			B								S	S	S	S
Template Predicted Secondary structure																																			.	.
Template SS confidence
		610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630	.	.	.	.	.	.	.	.	.	640	.	.			.	.	.	.	.	.	.	650	.	.	.	.	.	.	.	.	.	660	.	.	.	.	.	.	.	.	.	670	.	.	.	.	.	.	.	.	.	680	.	.	.	.	.	.	.
						713	.	.	.	.	.	.	720	.	.	.	.	.	.	.	.	.	730	.	.	.	.	.	.	.	.	.	740	.	.
Predicted Secondary structure		.	.	.	.
Query SS confidence		.	.	.	.
Query Sequence		.	.	.	.	L	K	P	G	E	T	Q	T	V	S	F	P	I	D	I	E	A	L	K	F	W	N	Q	Q	M	K	Y	D	A	E
Query Conservation		.	.	.	.
Alig confidence		.	.	.	.
Template Conservation
Template Sequence		L	G	N	P	M	K	K	N	A	Q	I	G	I	A	M	L	V	S	V	G	N	L	E	E	A	G	E	S	V	S	F	Q	L	Q
Template Known Secondary structure				T	T	B		T	T															T	T			S
Template Predicted Secondary structure
Template SS confidence
		689	690	.	.	.	.	.	.	.	.	.	700	.	.	.	.	.	.	.	.	.	710	.	.	.	.	.	.	.	.	.	720	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions