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Job DescriptionP33363
Confidence100.00%DateThu Jan 5 11:52:06 GMT 2012
Rank3Aligned Residues668
% Identity27%Templatec3f93D_
PDB info PDB header:hydrolaseChain: D: PDB Molecule:beta-glucosidase; PDBTitle: crystal structure of exo-1,3/1,4-beta-glucanase (exop) from2 pseudoalteromonas sp. bb1
Resolution2.45 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   23......30 .........40.........50.........60.........70.........80.....
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Query Sequence  LFGNHPLT. . . . PEARDAFVTELLKKMTVDEKIGQLRLISVGPDNPKEAIREMIKDGQVGAIFNTVT. . . . . . . . . . . . .
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Template Sequence  PYVNTKLKRDPAVEAQ. . . IEKLLAKMTIEQKVAQMIQPEIGYLTVEQ. . . . . MRKYGFGSYLNGGNTAPYGNKRADQAT
Template Known Secondary structure 




S



...S


BTTT

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S
TT

GGG

S

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   910.........20.... .....30.........40.........50... ......60.........70.........80
 
   86...90.........100.........110...... ...120.........130.........140.........150.......
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Query Sequence  . . . RQDIRAMQDQVMELSRLKIPLFFAYDVLHGQ. . . . . RTVFPISLGLASSFNLDAVKTVGRVSAYEAADDGLNMTWAP
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Template Conservation                      


 
   
   
     


 

    



 
  
    
     
 

 
     

Template Sequence  WLKYADEMYLAAMDSTLDGIAIPTVWGTDAMHGHSNVYGATLFPHNIGLGAARDTDLIKRIGQATAKEVAATGIEWSFAP
Template Known Secondary structure 

TTTS





TTSSTTSTT





TT
TT



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   81........90.........100.........110.........120.........130.........140.........150.........160
 
   158.160.........170.........180.........190......... 200.........210.........220.........230....
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Query Sequence  MVDVSRDPRWGRASEGFGEDTYLTSTMGKTMVEAMQGKSPAD. . . RYSVMTSVKHFAAYGAVEGGKEYNTVDMSPQRLFN
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Template Sequence  TVAVVRDDRWGRTYESYSEDPDLVKRYAGEMVTGIQGDVGADFLKGSNRIATAKHFVGDGGTERGVDRGNTLIDEKGLRD
Template Known Secondary structure  B





TTSTTGGGSS
S


TTTTTT
TT

B
S
GGG
GGG
TT



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   161........170.........180.........190.........200.........210.........220.........230.........240
 
   235....240.........250.........260.........270.........280.........290.........300.........310....
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Query Sequence  DYMPPYKAGLDAGSGAVMVALNSLNGTPATSDSWLLKDVLRDQWGFKGITVSDHGAIKELIKHGTAADPEDAVRVALKSG
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Template Sequence  IHSAGYFSAINQGVQSVMASFNSWNGKRVHGDKHLLTDVLKNQLGFDGFVVSDWNAH. . . . . KFVEGCDLEQCAQAINAG
Template Known Secondary structure  TTTTT
S
SSTTGGG











S

TTGG.....GGSTT
BTTB
T
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   241........250.........260.........270.........280.........290....... ..300.........310.....
 
   315....320.... .....330.........340.........350.........360.........370.........380.........390.
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Query Sequence  INMSMSDEYY. . . SKYLPGLIKSGKVTMAELDDAARHVLNVKYDMGLFNDPYSHLGPKESDPVDTNAESRLHRKEAREVA
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Template Sequence  VDVIMVPEHFEAFYHNTVKQVKAGVIAESRINDAVRRFLRAKIRWGVFTKSKPSARPESQHP. . QWLGAAEHRTLAREAV
Template Known Secondary structure 

B
TTTTSS
TTTTS
SGGGSGGGS
G..GGTT
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   316...320.........330.........340.........350.........360.........370....... ..380.........390...
 
   392.......400.........410.........420.........430....... ..440.........450.........460...
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Query Sequence  RESLVLLKNRLETLPLKKSATIAVVGPLADSKRDVMGSWSAAGVAD. . . . . . . . QSVTVLTGIKNAVGENGKVLYAKGAN
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Template Sequence  RKSLVLLKNNESILPIKASSRILVAGKGANAINMQAGGWSVSWQGTDNTNSDFPNATSIFSGLQSQVTKAGGKITLS. . .
Template Known Secondary structure 
GGG

SB
TTSSTTTT

SSSSSSS
TT

GGG
TT
B
TT

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   394.....400.........410.........420.........430.........440.........450.........460.........470
 
   464.....470.........480.........490.........500.........510......... 520.........530.........540.
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Query Sequence  VTSDKGIIDFLNQYEEAVKVDPRSPQEMIDEAVQTAKQSDVVVAVVGEAQGMAHEA. . SSRTDITIPQSQRDLIAALKAT
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Template Sequence  . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . ESGEYTSKPDVAIVVIGEEPYAEWFGDIELLEFQHETKHALALLKQLKAD
Template Known Secondary structure  ..............................TT


SS

S




GGGG

S

BTTTTT
T
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   471........480.........490.........500.........510.........520
 
   542.......550.........560.........570.........580.........590.. .......600.........610.....
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Query Sequence  GKPLVLVLMNGRPLALVKEDQQADAILETWFAGTEGGNAIADVLFGDYNPS. . . . . . GKLPMSFPRSVGQIPVYYSHLNT
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Template Sequence  NIPVVTVFLSGRPLWVNKELNASDAFVAAWLPGSEGE. GVADVLLTNKQGKTQFDFTGKLSFSWPKYDDQFT. . . . . . . .
Template Known Secondary structure  T


SS

B
T
S

TTBT.B

TTS









SS
B
SSTT

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   521........530.........540.........550....... ..560.........570.........580.........590.
 
   616...620.........630.........640.........650.........660.........670.........680.........690.....
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Query Sequence  GRPYNADKPNKYTSRYFDEANGALYPFGYGLSYTTFTVSDVKLSAPTMKRDGKVTASVQVTNTGKREGATVVQMYLQDVT
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Template Sequence  . . . . . . . . . LNLNDADYD. . . . PLFAYGYGLTYQDNINVP. . VLSEKTSPSHPLFVRSLAKNMTWQLADTSTQKVLASGA
Template Known Secondary structure  .........

TT
SS

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SB
TT

B
TT





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SSSB
TTSSS


SS
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   592.......600 .........610........ .620.........630.........640.........650......
 
   696...700.........710.. .......720.........730....... ..740.........750........
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Query Sequence  ASMSRPVKQLKGFEKIT. LKPGETQTVSFPIDIEALKFWNQQM. . . . . . . . . . . . . . . . KYDAEPGKFNVFIGTDSARVK
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Template Sequence  SATSGDKQSLL. MQSVNLSYQEDGRGFNWRAQAALSLSYLEPTPLDSKFSTGYLELKMRIDKAPEQGANLQVMCSESNC.
Template Known Secondary structure 

TTSSS.
SSSTT
SSS

GGGTT


SS

SS
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   664.....670.... .....680.........690.........700.........710.........720.........730.........740.
 
   759760....
Predicted Secondary structure 
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Query Sequence  KGEFEL
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Template Conservation     
 
Template Sequence  LRDIDF
Template Known Secondary structure  G
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   742.....
 
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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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