 |
Job Description | P33363 | Confidence | 55.71% | Date | Thu Jan 5 11:52:06 GMT 2012 |
Rank | 95 | Aligned Residues | 59 |
% Identity | 24% | Template | c2qv2A_ |
PDB info |
PDB header:hydrolase | Chain: A: PDB Molecule:inositol polyphosphate 5-phosphatase ocrl-1; |
PDBTitle: a role of the lowe syndrome protein ocrl in early steps of2 the endocytic pathway
|
Resolution | 2.40 Å |
|
 |
  |   |
647 | . | . | 650 | . | . | . | . | . | . | . | . | . | 660 | . | . | . | . | . | . | . | . | . | 670 | . | . | . | . | . | . | . | . | . | 680 | . | . | . | . | . | . | . | . | . | 690 | . | . | . | . | . | . | . | . | . | 700 | . | . | . | . | . | . | . | . | . | 710 | . | . | . | . | . | . | . | . | . | 720 | . | . | . | . | . |
Predicted Secondary structure |   |
|
|
|  |  |  |  |
|
|  |  |  |
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|  |  |  |
|
|  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
S | Y | T | T | F | T | V | S | D | V | K | L | S | A | P | T | M | K | R | D | G | K | V | T | A | S | V | Q | V | T | N | T | G | K | R | E | G | A | T | V | V | Q | M | Y | L | Q | D | V | T | A | S | M | S | R | P | V | K | Q | L | K | G | F | E | K | I | T | L | K | P | G | E | T | Q | T | V | S | F | P | I |
Query Conservation |   |
|
|
|   |
|   |
|
|   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|
|
|   |
|   |
|
|
|   |   |   |
|   |
|
|
|
|
|
|   |   |   |   |   |   |   |   |   |   |
|   |
|   |
|   |
|
|   |
|
|   |
|   |
|
|
|
|   |   |
|   |   |   |
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |   |   |   |   |
|
|   |
|   |   | . | . | . | . | . | . | . |   |   |   |   |   |   |   |
|   |
|   |
|   |
|
|   |   |   |   |   |   |   |   |   |
|
|   |   |   |
|   |   |   | . | . | . | . | . | . | . | . | . | . | . | . | . |   |
|   |
|
|
|   |   |   |
|   |
|   |   |
Template Sequence |   |
S | R | R | E | F | V | F | E | N | V | K | F | . |
. |
. |
. |
. |
. |
. |
R | Q | L | Q | K | E | K | F | Q | I | S | N | I | P | K | L | N | D | S | Q | Y | C | K | P | W | L | R | A | E | P | F | E | G | . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
Y | L | E | P | N | E | T | V | D | I | S | L | D | V |
Template Known Secondary structure |   |
|
|
|  |  |  |  |  |  |  |
| T | . | . | . | . | . | . | . | T |
|
|  |  |
|
|
|
|
|
|
|
|
|
| S |
| T | T | T | S |
|
| T | T |  |  |  |  | S |
|
|
| . | . | . | . | . | . | . | . | . | . | . | . | . |
|
|
| S | S |
|
|
|
|
|  |  |  |  |
Template Predicted Secondary structure |   |
|
|
|  |  |
|
|
|
|
|
|
| . | . | . | . | . | . | . |
|  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|  |  |
|
|
|
|
|  |  |  |
|
|
|
|
| . | . | . | . | . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|  |  |  |  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
9 | 10 | . | . | . | . | . | . | . | . | . | 20 | |
|
|
|
|
|
|
. | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | |
|
|
|
|
|
|
|
|
|
|
|
|
. | . | . | . | . | . | 60 | . | . | . | . | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|