 |
Job Description | P33363 | Confidence | 52.59% | Date | Thu Jan 5 11:52:06 GMT 2012 |
Rank | 103 | Aligned Residues | 87 |
% Identity | 15% | Template | c2l8aA_ |
PDB info |
PDB header:hydrolase | Chain: A: PDB Molecule:endoglucanase; |
PDBTitle: structure of a novel cbm3 lacking the calcium-binding site
|
Resolution | UNK |
|
 |
  |   |
653 | . | . | . | . | . | |
|
|
. | 660 | . | . | . | . | . | . | . | . | . | 670 | . | . | . | . | . | . | . | . | . | |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
680 | . | . | . | . | . | . | . | . | . | 690 | . | . | . | . | . | . | . | . | . | 700 |
Predicted Secondary structure |   |
 |
|
|  |  |  | . | . | . |
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |
|
| . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |
|
|
|
|
|  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
Query SS confidence |   |
|
|
|
|
|
| . |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
V | S | D | V | K | L | . |
. |
. |
S | A | P | T | M | K | R | D | G | K | V | T | A | S | V | Q | V | T | N | T | G | . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
K | R | E | G | A | T | V | V | Q | M | Y | L | Q | D | V | T | A | S | M | S | R |
Query Conservation |   |
|
|   |
|   |   | . | . | . |   |   |   |   |   |   |   |   |   |   |   |   |
|
|
|   |
|   |
|
|
| . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |   |   |   |
|   |
|
|
|
|
|
|   |   |   |   |   |   |   |   |   |   |
Alig confidence |   |
|
|
|
|
|
| . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |   |   |   |
|   |
|   |
|   |   |   |   |   |   |   |
|   |
|   |   |   |   |   |
|   |
|   |
|   |   |   |
|   |
|
|
|
|   |
|
|
|
|
|
|   |
|   |   |   |   |   |   |   |
|
|   |
|   |   |   |   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |
|
Template Sequence |   |
M | A | S | I | S | V | Q | Y | R | A | G | D | G | S | M | N | S | N | Q | I | R | P | Q | L | Q | I | K | N | N | G | N | T | T | V | D | L | K | D | V | T | A | R | Y | W | Y | K | A | K | N | K | G | Q | N | F | D | C | D | Y | A | Q | I | G | C | G | N | V | T | H | K | F | V | T | L | H | K | P | K | Q | G | A |
Template Known Secondary structure |   |
|
| S |
|  |  |  |  |  | S |
| S | S |
|
|
| T | T |  |  |
|
|  |  |  |  |  |
| T | T |
| S |
|
|
| G | G | G |  |  |  |  |  |  |  |
|
| S | S |
|
|
|  |  |  |  |  |  |  |
| S |
|
|
|
|
|  |  |  |  |  |  |
| S |
|
| S | S | S |
|
Template Predicted Secondary structure |   |
|
|
|  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|  |  |
|
|  |  |  |  |  |  |  |
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |
|
|
|
|
|
|
|
|
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
351 | . | . | . | . | . | . | . | . | 360 | . | . | . | . | . | . | . | . | . | 370 | . | . | . | . | . | . | . | . | . | 380 | . | . | . | . | . | . | . | . | . | 390 | . | . | . | . | . | . | . | . | . | 400 | . | . | . | . | . | . | . | . | . | 410 | . | . | . | . | . | . | . | . | . | 420 | . | . | . | . | . | . | . | . | . | 430 |
  |
  |   |
701 | . | . | . | . | . | . | . | . | 710 | . | . | . | . | . | . | . | . | . | |
720 | . | . | . | . | . | . | . | . | . | 730 | . | . | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
|
|  |  |  |
|
|  |  |  |  |  |  |
|
|
|
|  |  | . |  |  |  |  |  |  |
|  |  |  |  |  |  |  |
|
|
|
|
|  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
P | V | K | Q | L | K | G | F | E | K | I | T | L | K | P | G | E | T | Q | . |
T | V | S | F | P | I | D | I | E | A | L | K | F | W | N | Q | Q | M | K | Y |
Query Conservation |   |
|   |
|   |
|   |
|
|   |
|
|   |
|   |
|
|
|
|   | . |   |
|   |   |   |
|   |   |   |   |
|   |   |   |
|   |   |   |   |
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|   |
|
|
|
|   |
|
|   |
|   |
|   |
|
|   |   |
|   |
|
|
|   |
|
|   |   |   |   |
|
|   |   |
|
|
|
|
|
|
Template Sequence |   |
D | T | Y | L | E | L | G | F | K | N | G | T | L | A | P | G | A | S | T | G | N | I | Q | L | R | L | H | N | D | D | W | S | N | Y | A | Q | S | G | D | Y |
Template Known Secondary structure |   |
|  |  |  |  |  |  |  |
|
| S |
| S | S | T | T | S | S | S | S |
|  |  |  |  |  |  |
|
| T | T | S |
|
|
| T | T | T | T | T |
Template Predicted Secondary structure |   |
|  |  |  |  |  |  |  |
|
|
|  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
431 | . | . | . | . | . | . | . | . | 440 | . | . | . | . | . | . | . | . | . | 450 | . | . | . | . | . | . | . | . | . | 460 | . | . | . | . | . | . | . | . | . | 470 |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|