Return to main results Retrieve Phyre Job Id

Job DescriptionP33363
Confidence96.94%DateThu Jan 5 11:52:06 GMT 2012
Rank15Aligned Residues84
% Identity24%Templatec2kutA_
PDB info PDB header:structural genomics, unknown functionChain: A: PDB Molecule:uncharacterized protein; PDBTitle: solution structure of gmr58a from geobacter metallireducens.2 northeast structural genomics consortium target gmr58a
ResolutionUNK

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   656...660.........670.........680. ........690.........700.........710. ........720.........730...
Predicted Secondary structure 












.














.




Query SS confidence 

























.





























.





















Query Sequence  VKLSAPTMKRDGKVTASVQVTNTGKR. EGATVVQMYLQDVTASMSRPVKQLKGFEKI. TLKPGETQTVSFPIDIEALKFW
Query Conservation 
              


 
 


  . 
 





          
 
 
 

 

. 
 



  
   
    
   
Alig confidence 

























.

















.....






.














......
Template Conservation 

  
 

  
  


  

 
 
   
    
  
         .....         
  
     
    ...... 
Template Sequence  ITLSKETPFEGEEITVSARVTNRGAAEAHNVPVAVYLGNPAQGGV. . . . . EIGRDTISRIPVGGTGLARVQWK. . . . . . A
Template Known Secondary structure 

TTS

TT


SSS
B




SS
TTT


.....

B



S
B
TT


......
Template Predicted Secondary structure 























.....









......
Template SS confidence 















































































   5....10.........20.........30.........40......... 50.........60.........70.. .
 
   734.....740.........750
Predicted Secondary structure 







Query SS confidence 
















Query Sequence  NQQMKYDAEPGKFNVFI
Query Conservation 
    
    
 
   
Alig confidence 
















Template Conservation            
 
 
 
Template Sequence  TRKLAGRAANPGVPVYA
Template Known Secondary structure 



SS

S






Template Predicted Secondary structure 











Template SS confidence 
















   74.....80.........90
 
Download:Text version FASTA pairwise alignment 3D Model in PDB format

View in Jmol

Send structure to FirstGlance for more viewing options


Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions