Job Description P28916 Confidence 8.21% Date Thu Jan 5 11:45:26 GMT 2012 Rank 50 Aligned Residues 51 % Identity 20% Template c3l1pA_ PDB info PDB header:transcription/dna Chain: A: PDB Molecule:pou domain, class 5, transcription factor 1; PDBTitle: pou protein:dna complex Resolution 2.80 Å

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		45	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.													.	.	70	.	.	.	.	.	.	.	.	.		80	.	.	.	.	.				.	.	.	.	90	.	.	.	.	.	.
Predicted Secondary structure																									.	.	.	.	.	.	.	.	.	.	.	.													.							.	.	.
Query SS confidence																									.	.	.	.	.	.	.	.	.	.	.	.													.							.	.	.
Query Sequence		E	D	I	E	D	F	G	E	T	H	P	D	F	L	K	Q	Y	G	D	F	E	N	G	.	.	.	.	.	.	.	.	.	.	.	.	I	P	V	H	D	T	I	A	R	V	V	S	.	C	I	C	P	A	K	.	.	.	F	H	E	S	F	I	N	W	M	L	D
Query Conservation																									.	.	.	.	.	.	.	.	.	.	.	.													.							.	.	.
Alig confidence																			.						.	.	.	.	.	.	.	.	.	.	.	.													.							.	.	.
Template Conservation																			.
Template Sequence		K	E	L	E	Q	F	A	K	L	L	K	Q	K	R	I	T	L	.	G	Y	T	Q	A	D	V	G	L	T	L	G	V	L	F	G	K	V	F	S	Q	T	T	I	S	R	F	E	A	L	Q	L	S	L	K	N	M	S	K	L	R	P	L	L	E	K	W	V	E	E
Template Known Secondary structure																		T	.	T															S													T	T		S
Template Predicted Secondary structure																			.
Template SS confidence
		7	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.		.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions