 |
Job Description | P28916 | Confidence | 9.99% | Date | Thu Jan 5 11:45:26 GMT 2012 |
Rank | 34 | Aligned Residues | 30 |
% Identity | 23% | Template | c2k27A_ |
PDB info |
PDB header:transcription regulator | Chain: A: PDB Molecule:paired box protein pax-8; |
PDBTitle: solution structure of human pax8 paired box domain
|
Resolution | UNK |
|
  |   |
50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | |
. | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |  |
|
|
| . |
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
F | G | E | T | H | P | D | F | L | K | Q | Y | G | D | F | . |
E | N | G | I | P | V | H | D | T | I | A | R | V | V | S |
Query Conservation |   |
|   |   |   |   |   |   |   |
|
|   |   |
|   |
| . |   |   |
|
|
|
|   |
|
|   |
|
|
|
|   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|
|
|
|
|
|   |   |
|   |   |   |
|
|
|   |   |   |   |
|
|
|
|
|
|
|   |
|
|
|
|
Template Sequence |   |
F | A | W | E | I | R | D | R | L | L | A | E | G | V | C | D | N | D | T | V | P | S | V | S | S | I | N | R | I | I | R |
Template Known Secondary structure |   |
|  |  |  |  |  |  |  |  |  |  |  | T |
| S |
| T | T | T | S |
|
|  |  |  |  |  |  |  |  |  |
Template Predicted Secondary structure |   |
|  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
103 | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|