 |
Job Description | P28916 | Confidence | 5.03% | Date | Thu Jan 5 11:45:26 GMT 2012 |
Rank | 99 | Aligned Residues | 54 |
% Identity | 26% | Template | c2hq1A_ |
PDB info |
PDB header:oxidoreductase | Chain: A: PDB Molecule:glucose/ribitol dehydrogenase; |
PDBTitle: crystal structure of orf 1438 a putative glucose/ribitol2 dehydrogenase from clostridium thermocellum
|
Resolution | 1.90 Å |
|
  |   |
162 | . | . | . | . | . | |
|
. | . | 170 | . | . | . | . | . | . | . | . | . | 180 | . | . | . | . | . | . | . | . | . | 190 | . | . | . | . | . | . | . | . | . | 200 | . | . | . | . | . | . | . | . | . | 210 | . | . | . | . | . | . |
Predicted Secondary structure |   |
|
|
|
|
|
| . | . |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
Query SS confidence |   |
|
|
|
|
|
| . |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
L | D | I | K | G | K | . |
. |
I | I | K | T | D | A | M | G | C | Q | K | D | I | A | E | K | I | Q | K | Q | G | G | D | Y | L | F | A | V | K | G | N | Q | G | R | L | N | K | A | F | E | E | K | F | P | L | K | E | L | N |
Query Conservation |   |
|   |
|   |
|   | . | . |
|
|
|   |
|
|
|   |   |
|   |   |   |
|   |   |
|   |   |   |   |   |
|
|
|
|   |
|
|   |
|
|   |   |
|   |   |   |   |   |   |   |
|   |   |   |   |   |   |
Alig confidence |   |
|
|
|
|
|
| . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|   |
|   |
|
|   |
|
|
|
|
|
|
|   |
|
|
|   |
|   |
|   |   |
|   |   |   |
|
|   | . |
|   |   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
Template Sequence |   |
M | Q | L | K | G | K | T | A | I | V | T | G | S | S | R | G | L | G | K | A | I | A | W | K | L | G | N | M | G | A | N | . |
I | V | L | N | G | S | P | A | S | T | S | L | D | A | T | A | E | E | F | K | A | A | G | I | N |
Template Known Secondary structure |   |
| T | T | T | T |
|  |  |  |  | S | S |
| S | S |  |  |  |  |  |  |  |  |  |  |  |  | T | T |
|  | . |  |  |  |  |  |
| T | T |
| S |  |  |  |  |  |  |  |  |  |  |  | T | T |
|
|
Template Predicted Secondary structure |   |
|
|
|
|
|
|  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  | . |  |  |  |  |  |
|
|  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
1 | . | . | . | . | . | . | . | . | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | |
. | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|