Job Description P25539 Confidence 99.97% Date Thu Jan 5 11:42:04 GMT 2012 Rank 24 Aligned Residues 113 % Identity 36% Template d1vq2a_ SCOP info Cytidine deaminase-like Cytidine deaminase-like Deoxycytidylate deaminase-like Resolution 2.20

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Show / Hide Conservation and Alignment quality

		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.
Predicted Secondary structure																																															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		M	Q	D	E	Y	Y	M	A	R	A	L	K	L	A	Q	R	G	R	F	T	T	H	P	N	P	N	V	G	C	V	I	V	K	D	G	E	I	V	G	E	G	Y	H	Q	R	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Conservation																																															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																				.	.	.																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																				.	.	.
Template Sequence		M	K	A	S	T	V	L	Q	I	A	Y	L	V	S	Q	E	S	K	.	.	.	C	C	S	W	K	V	G	A	V	I	E	K	N	G	R	I	I	S	T	G	Y	N	G	S	P	A	G	G	V	N	C	C	D	Y	A	A	E	Q	G	W	L	L	N	K	R	F	V	L	A	K	E	H	R	S	A	H	S	E	W
Template Known Secondary structure																T	T			.	.	.		S	S	B									T	T									B			T	T	S											T											G	G	G
Template Predicted Secondary structure																				.	.	.
Template SS confidence
		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.				.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.
				46	.	.	.	50	.	.	.	.	.	.	.	.	.				60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120
Predicted Secondary structure		.	.															.	.	.
Query SS confidence		.	.															.	.	.
Query Sequence		.	.	A	G	E	P	H	A	E	V	H	A	L	R	M	A	.	.	.	G	E	K	A	K	G	A	T	A	Y	V	T	L	E	P	C	S	H	H	G	R	T	P	P	C	C	D	A	L	I	A	A	G	V	A	R	V	V	A	S	M	Q	D	P	N	P	Q	V	A	G	R	G	L	Y	R	L	Q	Q	A	G	I
Query Conservation		.	.															.	.	.
Alig confidence		.	.															.	.	.																	.	.	.	.	.	.																			.	.
Template Conservation																																					.	.	.	.	.	.																			.	.
Template Sequence		S	S	K	N	E	I	H	A	E	L	N	A	I	L	F	A	A	E	N	G	S	S	I	E	G	A	T	M	Y	V	T	L	S	P	C	.	.	.	.	.	.	P	D	C	A	K	A	I	A	Q	S	G	I	K	K	L	V	Y	C	.	.	E	T	Y	D	K	N	K	P	G	W	D	D	I	L	R	N	A	G	I
Template Known Secondary structure							B														T				T	T											.	.	.	.	.	.											T								.	.				T	T			T	T	T	T						T	T
Template Predicted Secondary structure																																					.	.	.	.	.	.																			.	.
Template SS confidence
		98	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.							.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150			.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.
		121	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	V	S	H
Query Conservation
Alig confidence
Template Conservation
Template Sequence		E	V	F	N
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		170	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions